Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABREP78334 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.65■□□□□ 0.58
GABREP78334 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABREP78334 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GABREP78334 AC018553.1-201ENST00000616682 1458 ntBASIC18.65■□□□□ 0.58
GABREP78334 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GABREP78334 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GABREP78334 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GABREP78334 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
GABREP78334 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABREP78334 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABREP78334 AC004951.3-201ENST00000418645 1148 ntBASIC18.64■□□□□ 0.57
GABREP78334 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.64■□□□□ 0.57
GABREP78334 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.64■□□□□ 0.57
GABREP78334 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.64■□□□□ 0.57
GABREP78334 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GABREP78334 AL138966.2-201ENST00000621997 464 ntBASIC18.64■□□□□ 0.57
GABREP78334 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
GABREP78334 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABREP78334 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GABREP78334 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.64■□□□□ 0.57
GABREP78334 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABREP78334 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GABREP78334 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABREP78334 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.64■□□□□ 0.57
GABREP78334 AC005229.4-201ENST00000610085 2198 ntBASIC18.64■□□□□ 0.57
GABREP78334 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.64■□□□□ 0.57
GABREP78334 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.63■□□□□ 0.57
GABREP78334 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.63■□□□□ 0.57
GABREP78334 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 FEM1AP4-201ENST00000443167 1987 ntBASIC18.63■□□□□ 0.57
GABREP78334 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 TSPY5P-201ENST00000426936 936 ntBASIC18.63■□□□□ 0.57
GABREP78334 FAM207BP-201ENST00000447172 505 ntBASIC18.63■□□□□ 0.57
GABREP78334 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.63■□□□□ 0.57
GABREP78334 COX11P1-201ENST00000489116 835 ntBASIC18.63■□□□□ 0.57
GABREP78334 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GABREP78334 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
GABREP78334 AL121894.2-201ENST00000602977 491 ntBASIC18.63■□□□□ 0.57
GABREP78334 AP000550.4-202ENST00000639755 178 ntBASIC18.63■□□□□ 0.57
GABREP78334 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GABREP78334 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GABREP78334 DPP3P2-201ENST00000416030 1696 ntBASIC18.63■□□□□ 0.57
GABREP78334 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
GABREP78334 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GABREP78334 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.62■□□□□ 0.57
GABREP78334 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.62■□□□□ 0.57
GABREP78334 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.62■□□□□ 0.57
GABREP78334 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GABREP78334 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.62■□□□□ 0.57
GABREP78334 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GABREP78334 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
GABREP78334 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.61■□□□□ 0.57
GABREP78334 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.61■□□□□ 0.57
GABREP78334 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GABREP78334 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
GABREP78334 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GABREP78334 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.61■□□□□ 0.57
GABREP78334 SLC25A1P2-201ENST00000430693 912 ntBASIC18.61■□□□□ 0.57
GABREP78334 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.61■□□□□ 0.57
GABREP78334 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.61■□□□□ 0.57
GABREP78334 KRT126P-201ENST00000549467 1181 ntBASIC18.61■□□□□ 0.57
GABREP78334 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
GABREP78334 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.61■□□□□ 0.57
GABREP78334 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GABREP78334 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GABREP78334 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.61■□□□□ 0.57
GABREP78334 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 AC096733.2-201ENST00000609937 1394 ntBASIC18.6■□□□□ 0.57
GABREP78334 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GABREP78334 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GABREP78334 AC009947.2-201ENST00000444014 672 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms