Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN2P57739 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLDN2P57739 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN2P57739 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLDN2P57739 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 FEM1AP1-201ENST00000431297 1995 ntBASIC19.35■□□□□ 0.69
CLDN2P57739 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN2P57739 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN2P57739 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLDN2P57739 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN2P57739 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLDN2P57739 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN2P57739 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN2P57739 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLDN2P57739 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN2P57739 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN2P57739 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 AL691432.2-201ENST00000607222 2038 ntBASIC19.35■□□□□ 0.69
CLDN2P57739 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CLDN2P57739 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLDN2P57739 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN2P57739 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN2P57739 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN2P57739 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLDN2P57739 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLDN2P57739 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN2P57739 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CLDN2P57739 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 TMPOP1-202ENST00000424642 1267 ntBASIC19.34■□□□□ 0.69
CLDN2P57739 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN2P57739 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN2P57739 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.34■□□□□ 0.69
CLDN2P57739 AC005363.2-201ENST00000618631 242 ntBASIC19.34■□□□□ 0.69
CLDN2P57739 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN2P57739 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CLDN2P57739 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN2P57739 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN2P57739 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN2P57739 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN2P57739 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN2P57739 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN2P57739 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN2P57739 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN2P57739 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN2P57739 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN2P57739 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.33■□□□□ 0.69
CLDN2P57739 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN2P57739 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN2P57739 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.33■□□□□ 0.68
CLDN2P57739 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN2P57739 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN2P57739 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDN2P57739 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.33■□□□□ 0.68
CLDN2P57739 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN2P57739 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN2P57739 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN2P57739 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN2P57739 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN2P57739 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN2P57739 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CLDN2P57739 AP001271.2-201ENST00000624018 1556 ntBASIC19.32■□□□□ 0.68
CLDN2P57739 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN2P57739 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CLDN2P57739 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN2P57739 AC005521.1-201ENST00000393351 872 ntBASIC19.32■□□□□ 0.68
CLDN2P57739 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms