Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA4P54764 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA4P54764 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.87■□□□□ 0.61
EPHA4P54764 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHA4P54764 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
EPHA4P54764 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EPHA4P54764 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EPHA4P54764 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EPHA4P54764 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
EPHA4P54764 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EPHA4P54764 MIR1238-201ENST00000408483 83 ntBASIC18.87■□□□□ 0.61
EPHA4P54764 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHA4P54764 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
EPHA4P54764 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 B3GAT3P1-201ENST00000471720 806 ntBASIC18.87■□□□□ 0.61
EPHA4P54764 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.87■□□□□ 0.61
EPHA4P54764 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.87■□□□□ 0.61
EPHA4P54764 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
EPHA4P54764 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.87■□□□□ 0.61
EPHA4P54764 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA4P54764 GABARAPL3-202ENST00000624044 1851 ntBASIC18.87■□□□□ 0.61
EPHA4P54764 HLA-A-209ENST00000638375 975 ntBASIC18.87■□□□□ 0.61
EPHA4P54764 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.86■□□□□ 0.61
EPHA4P54764 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA4P54764 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA4P54764 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA4P54764 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA4P54764 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EPHA4P54764 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
EPHA4P54764 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
EPHA4P54764 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.86■□□□□ 0.61
EPHA4P54764 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.86■□□□□ 0.61
EPHA4P54764 MESTP1-201ENST00000404287 994 ntBASIC18.86■□□□□ 0.61
EPHA4P54764 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA4P54764 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
EPHA4P54764 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHA4P54764 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHA4P54764 AC145285.6-201ENST00000604632 637 ntBASIC18.86■□□□□ 0.61
EPHA4P54764 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.86■□□□□ 0.61
EPHA4P54764 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA4P54764 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.85■□□□□ 0.61
EPHA4P54764 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
EPHA4P54764 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA4P54764 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
EPHA4P54764 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHA4P54764 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.85■□□□□ 0.61
EPHA4P54764 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 AL162377.1-201ENST00000618844 1793 ntBASIC18.85■□□□□ 0.61
EPHA4P54764 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHA4P54764 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
EPHA4P54764 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHA4P54764 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA4P54764 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHA4P54764 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.84■□□□□ 0.61
EPHA4P54764 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHA4P54764 NAPSB-206ENST00000562112 1266 ntBASIC18.84■□□□□ 0.61
EPHA4P54764 AP005242.2-201ENST00000580065 1175 ntBASIC18.84■□□□□ 0.61
EPHA4P54764 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
EPHA4P54764 AC009237.14-201ENST00000609975 1594 ntBASIC18.84■□□□□ 0.61
EPHA4P54764 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
EPHA4P54764 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
EPHA4P54764 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHA4P54764 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
EPHA4P54764 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms