Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP1B3P54709 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP1B3P54709 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP1B3P54709 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP1B3P54709 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP1B3P54709 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP1B3P54709 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.96■□□□□ 0.31
ATP1B3P54709 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP1B3P54709 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP1B3P54709 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP1B3P54709 AC093787.1-201ENST00000450396 207 ntBASIC16.96■□□□□ 0.31
ATP1B3P54709 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP1B3P54709 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATP1B3P54709 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP1B3P54709 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP1B3P54709 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 TREX1-205ENST00000625293 1783 ntBASIC16.96■□□□□ 0.31
ATP1B3P54709 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP1B3P54709 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP1B3P54709 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP1B3P54709 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ATP1B3P54709 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP1B3P54709 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATP1B3P54709 NEFHP1-201ENST00000412845 2629 ntBASIC16.96■□□□□ 0.3
ATP1B3P54709 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP1B3P54709 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP1B3P54709 KRT17P1-201ENST00000399211 1546 ntBASIC16.96■□□□□ 0.3
ATP1B3P54709 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP1B3P54709 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 AC004911.1-201ENST00000416316 871 ntBASIC16.95■□□□□ 0.3
ATP1B3P54709 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP1B3P54709 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP1B3P54709 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP1B3P54709 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP1B3P54709 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATP1B3P54709 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP1B3P54709 AC133552.2-202ENST00000575694 574 ntBASIC16.94■□□□□ 0.3
ATP1B3P54709 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.94■□□□□ 0.3
ATP1B3P54709 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP1B3P54709 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.94■□□□□ 0.3
ATP1B3P54709 AC080038.1-201ENST00000611274 1154 ntBASIC16.94■□□□□ 0.3
ATP1B3P54709 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP1B3P54709 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP1B3P54709 PHGDH-210ENST00000641115 1638 ntBASIC16.94■□□□□ 0.3
ATP1B3P54709 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATP1B3P54709 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP1B3P54709 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP1B3P54709 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP1B3P54709 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP1B3P54709 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms