Protein–RNA interactions for Protein: P53677

AP3M2, AP-3 complex subunit mu-2, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2P53677 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3M2P53677 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
AP3M2P53677 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3M2P53677 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.1■□□□□ 0.97
AP3M2P53677 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
AP3M2P53677 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.1■□□□□ 0.97
AP3M2P53677 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
AP3M2P53677 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.1■□□□□ 0.97
AP3M2P53677 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
AP3M2P53677 AC142381.4-202ENST00000563973 229 ntBASIC21.1■□□□□ 0.97
AP3M2P53677 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.1■□□□□ 0.97
AP3M2P53677 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.1■□□□□ 0.97
AP3M2P53677 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.1■□□□□ 0.97
AP3M2P53677 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.1■□□□□ 0.97
AP3M2P53677 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP3M2P53677 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.1■□□□□ 0.97
AP3M2P53677 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3M2P53677 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
AP3M2P53677 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3M2P53677 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP3M2P53677 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3M2P53677 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.1■□□□□ 0.97
AP3M2P53677 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
AP3M2P53677 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
AP3M2P53677 GCSHP5-201ENST00000443090 522 ntBASIC21.09■□□□□ 0.97
AP3M2P53677 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.09■□□□□ 0.97
AP3M2P53677 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.09■□□□□ 0.97
AP3M2P53677 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
AP3M2P53677 FAM197Y4-202ENST00000622692 608 ntBASIC21.09■□□□□ 0.97
AP3M2P53677 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
AP3M2P53677 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP3M2P53677 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.09■□□□□ 0.97
AP3M2P53677 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3M2P53677 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.08■□□□□ 0.97
AP3M2P53677 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP3M2P53677 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.08■□□□□ 0.97
AP3M2P53677 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3M2P53677 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP3M2P53677 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP3M2P53677 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.08■□□□□ 0.97
AP3M2P53677 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP3M2P53677 AC098590.1-201ENST00000468126 897 ntBASIC21.08■□□□□ 0.97
AP3M2P53677 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.08■□□□□ 0.97
AP3M2P53677 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP3M2P53677 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.08■□□□□ 0.97
AP3M2P53677 C1QL1P1-201ENST00000568105 661 ntBASIC21.08■□□□□ 0.97
AP3M2P53677 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP3M2P53677 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
AP3M2P53677 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.08■□□□□ 0.96
AP3M2P53677 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
AP3M2P53677 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP3M2P53677 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.08■□□□□ 0.96
AP3M2P53677 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
AP3M2P53677 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.08■□□□□ 0.96
AP3M2P53677 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.07■□□□□ 0.96
AP3M2P53677 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.07■□□□□ 0.96
AP3M2P53677 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
AP3M2P53677 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.07■□□□□ 0.96
AP3M2P53677 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
AP3M2P53677 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.07■□□□□ 0.96
AP3M2P53677 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.07■□□□□ 0.96
AP3M2P53677 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.07■□□□□ 0.96
AP3M2P53677 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.07■□□□□ 0.96
AP3M2P53677 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.07■□□□□ 0.96
AP3M2P53677 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.07■□□□□ 0.96
AP3M2P53677 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.07■□□□□ 0.96
AP3M2P53677 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.07■□□□□ 0.96
AP3M2P53677 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.07■□□□□ 0.96
AP3M2P53677 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
AP3M2P53677 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.07■□□□□ 0.96
AP3M2P53677 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3M2P53677 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
AP3M2P53677 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M2P53677 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M2P53677 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M2P53677 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M2P53677 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M2P53677 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
AP3M2P53677 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M2P53677 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
AP3M2P53677 UBE2SP1-201ENST00000450587 669 ntBASIC21.06■□□□□ 0.96
AP3M2P53677 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.06■□□□□ 0.96
AP3M2P53677 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms