Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 C2orf69P4-201ENST00000565394 541 ntBASIC19.73■□□□□ 0.75
LIMK2P53671 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 AP000974.1-201ENST00000623909 2387 ntBASIC19.73■□□□□ 0.75
LIMK2P53671 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
LIMK2P53671 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
LIMK2P53671 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIMK2P53671 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.72■□□□□ 0.75
LIMK2P53671 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.72■□□□□ 0.75
LIMK2P53671 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.72■□□□□ 0.75
LIMK2P53671 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.72■□□□□ 0.75
LIMK2P53671 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.72■□□□□ 0.75
LIMK2P53671 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.72■□□□□ 0.75
LIMK2P53671 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIMK2P53671 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.72■□□□□ 0.75
LIMK2P53671 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
LIMK2P53671 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
LIMK2P53671 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.71■□□□□ 0.75
LIMK2P53671 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.71■□□□□ 0.75
LIMK2P53671 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.71■□□□□ 0.75
LIMK2P53671 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LIMK2P53671 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIMK2P53671 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LIMK2P53671 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
LIMK2P53671 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LIMK2P53671 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.7■□□□□ 0.74
LIMK2P53671 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.7■□□□□ 0.74
LIMK2P53671 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 KRT17P3-201ENST00000420566 1262 ntBASIC19.7■□□□□ 0.74
LIMK2P53671 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.7■□□□□ 0.74
LIMK2P53671 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.7■□□□□ 0.74
LIMK2P53671 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK2P53671 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK2P53671 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK2P53671 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.7■□□□□ 0.74
LIMK2P53671 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LIMK2P53671 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LIMK2P53671 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
LIMK2P53671 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIMK2P53671 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
LIMK2P53671 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.69■□□□□ 0.74
LIMK2P53671 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
LIMK2P53671 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LIMK2P53671 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.69■□□□□ 0.74
LIMK2P53671 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LIMK2P53671 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.69■□□□□ 0.74
LIMK2P53671 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.69■□□□□ 0.74
LIMK2P53671 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms