Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.75■□□□□ 0.91
PSEN1P49768 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC20.75■□□□□ 0.91
PSEN1P49768 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.75■□□□□ 0.91
PSEN1P49768 BX119927.1-201ENST00000636596 1552 ntBASIC20.75■□□□□ 0.91
PSEN1P49768 AC005082.1-201ENST00000413042 2259 ntBASIC20.75■□□□□ 0.91
PSEN1P49768 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSEN1P49768 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.75■□□□□ 0.91
PSEN1P49768 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PSEN1P49768 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PSEN1P49768 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.74■□□□□ 0.91
PSEN1P49768 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.74■□□□□ 0.91
PSEN1P49768 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.74■□□□□ 0.91
PSEN1P49768 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.74■□□□□ 0.91
PSEN1P49768 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.74■□□□□ 0.91
PSEN1P49768 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.74■□□□□ 0.91
PSEN1P49768 AC116351.2-201ENST00000606540 1585 ntBASIC20.74■□□□□ 0.91
PSEN1P49768 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.74■□□□□ 0.91
PSEN1P49768 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.74■□□□□ 0.91
PSEN1P49768 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.74■□□□□ 0.91
PSEN1P49768 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.74■□□□□ 0.91
PSEN1P49768 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSEN1P49768 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.73■□□□□ 0.91
PSEN1P49768 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PSEN1P49768 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PSEN1P49768 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PSEN1P49768 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 AC093827.2-201ENST00000512654 315 ntBASIC20.73■□□□□ 0.91
PSEN1P49768 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.73■□□□□ 0.91
PSEN1P49768 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.73■□□□□ 0.91
PSEN1P49768 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.73■□□□□ 0.91
PSEN1P49768 NBPF21P-201ENST00000425093 1451 ntBASIC20.73■□□□□ 0.91
PSEN1P49768 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PSEN1P49768 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
PSEN1P49768 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.73■□□□□ 0.91
PSEN1P49768 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PSEN1P49768 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.72■□□□□ 0.91
PSEN1P49768 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PSEN1P49768 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PSEN1P49768 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.72■□□□□ 0.91
PSEN1P49768 PHGDH-210ENST00000641115 1638 ntBASIC20.72■□□□□ 0.91
PSEN1P49768 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PSEN1P49768 MIR718-201ENST00000390190 70 ntBASIC20.72■□□□□ 0.91
PSEN1P49768 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.72■□□□□ 0.91
PSEN1P49768 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.72■□□□□ 0.91
PSEN1P49768 AC008550.1-201ENST00000511500 884 ntBASIC20.72■□□□□ 0.91
PSEN1P49768 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.72■□□□□ 0.91
PSEN1P49768 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.72■□□□□ 0.91
PSEN1P49768 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.72■□□□□ 0.91
PSEN1P49768 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.72■□□□□ 0.91
PSEN1P49768 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PSEN1P49768 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.72■□□□□ 0.91
PSEN1P49768 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PSEN1P49768 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PSEN1P49768 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.72■□□□□ 0.91
PSEN1P49768 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.72■□□□□ 0.91
PSEN1P49768 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PSEN1P49768 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PSEN1P49768 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.71■□□□□ 0.91
PSEN1P49768 LINC01006-201ENST00000333319 2292 ntBASIC20.71■□□□□ 0.91
PSEN1P49768 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PSEN1P49768 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PSEN1P49768 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PSEN1P49768 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PSEN1P49768 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.71■□□□□ 0.91
PSEN1P49768 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.71■□□□□ 0.91
PSEN1P49768 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 AKR1B10P2-201ENST00000577332 927 ntBASIC20.71■□□□□ 0.91
PSEN1P49768 AC004264.1-201ENST00000608354 794 ntBASIC20.71■□□□□ 0.91
PSEN1P49768 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PSEN1P49768 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PSEN1P49768 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms