Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT6CP48668 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6CP48668 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6CP48668 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT6CP48668 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT6CP48668 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6CP48668 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT6CP48668 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT6CP48668 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT6CP48668 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KRT6CP48668 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
KRT6CP48668 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT6CP48668 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 AC092118.2-201ENST00000613495 667 ntBASIC18.96■□□□□ 0.63
KRT6CP48668 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT6CP48668 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT6CP48668 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT6CP48668 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
KRT6CP48668 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT6CP48668 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT6CP48668 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 BX323043.1-201ENST00000641006 1765 ntBASIC18.96■□□□□ 0.63
KRT6CP48668 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT6CP48668 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT6CP48668 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 SLC29A4P1-201ENST00000398760 971 ntBASIC18.95■□□□□ 0.62
KRT6CP48668 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT6CP48668 DUSP5P2-201ENST00000426873 1033 ntBASIC18.95■□□□□ 0.62
KRT6CP48668 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT6CP48668 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
KRT6CP48668 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT6CP48668 AC005829.2-201ENST00000571422 1056 ntBASIC18.95■□□□□ 0.62
KRT6CP48668 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 AC120498.9-201ENST00000339021 3867 ntBASIC18.95■□□□□ 0.62
KRT6CP48668 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT6CP48668 Z82202.1-201ENST00000623446 1880 ntBASIC18.94■□□□□ 0.62
KRT6CP48668 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
KRT6CP48668 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 AC018445.3-201ENST00000624177 1945 ntBASIC18.94■□□□□ 0.62
KRT6CP48668 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KRT6CP48668 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.94■□□□□ 0.62
KRT6CP48668 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT6CP48668 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT6CP48668 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT6CP48668 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT6CP48668 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.94■□□□□ 0.62
KRT6CP48668 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KRT6CP48668 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KRT6CP48668 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT6CP48668 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KRT6CP48668 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT6CP48668 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT6CP48668 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms