Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.49■□□□□ 0.71
CTSKP43235 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.49■□□□□ 0.71
CTSKP43235 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.49■□□□□ 0.71
CTSKP43235 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.49■□□□□ 0.71
CTSKP43235 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.49■□□□□ 0.71
CTSKP43235 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.49■□□□□ 0.71
CTSKP43235 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.49■□□□□ 0.71
CTSKP43235 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.49■□□□□ 0.71
CTSKP43235 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTSKP43235 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTSKP43235 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.48■□□□□ 0.71
CTSKP43235 KRT18P57-201ENST00000443599 1254 ntBASIC19.48■□□□□ 0.71
CTSKP43235 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 C1QL1P1-201ENST00000568105 661 ntBASIC19.48■□□□□ 0.71
CTSKP43235 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.48■□□□□ 0.71
CTSKP43235 AL031985.4-201ENST00000642138 673 ntBASIC19.48■□□□□ 0.71
CTSKP43235 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.48■□□□□ 0.71
CTSKP43235 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CTSKP43235 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTSKP43235 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSKP43235 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
CTSKP43235 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSKP43235 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.47■□□□□ 0.71
CTSKP43235 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.47■□□□□ 0.71
CTSKP43235 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 AP006587.1-201ENST00000534129 1502 ntBASIC19.47■□□□□ 0.71
CTSKP43235 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 TERF1P1-201ENST00000311003 1181 ntBASIC19.47■□□□□ 0.71
CTSKP43235 AL137013.1-201ENST00000432946 1228 ntBASIC19.47■□□□□ 0.71
CTSKP43235 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.47■□□□□ 0.71
CTSKP43235 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.47■□□□□ 0.71
CTSKP43235 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CTSKP43235 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CTSKP43235 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.47■□□□□ 0.71
CTSKP43235 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSKP43235 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSKP43235 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CTSKP43235 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.46■□□□□ 0.71
CTSKP43235 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.46■□□□□ 0.71
CTSKP43235 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSKP43235 AC073508.3-201ENST00000619697 1419 ntBASIC19.46■□□□□ 0.71
CTSKP43235 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.46■□□□□ 0.71
CTSKP43235 SLC25A3P1-201ENST00000443844 931 ntBASIC19.46■□□□□ 0.71
CTSKP43235 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.46■□□□□ 0.71
CTSKP43235 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.46■□□□□ 0.71
CTSKP43235 AL445675.2-201ENST00000620291 557 ntBASIC19.46■□□□□ 0.71
CTSKP43235 LINC01006-201ENST00000333319 2292 ntBASIC19.46■□□□□ 0.71
CTSKP43235 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSKP43235 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTSKP43235 PLK5-205ENST00000642079 1969 ntBASIC19.46■□□□□ 0.71
CTSKP43235 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSKP43235 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.46■□□□□ 0.71
CTSKP43235 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSKP43235 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSKP43235 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSKP43235 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CTSKP43235 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSKP43235 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSKP43235 MESTP1-201ENST00000404287 994 ntBASIC19.45■□□□□ 0.7
CTSKP43235 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSKP43235 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.45■□□□□ 0.7
CTSKP43235 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSKP43235 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSKP43235 AC026271.3-201ENST00000571884 352 ntBASIC19.45■□□□□ 0.7
CTSKP43235 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSKP43235 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSKP43235 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTSKP43235 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms