Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFRP42898 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFRP42898 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFRP42898 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MTHFRP42898 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MTHFRP42898 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFRP42898 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.52■□□□□ 0.88
MTHFRP42898 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
MTHFRP42898 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFRP42898 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFRP42898 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.52■□□□□ 0.88
MTHFRP42898 Z98882.1-201ENST00000622160 2253 ntBASIC20.52■□□□□ 0.88
MTHFRP42898 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.52■□□□□ 0.88
MTHFRP42898 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.52■□□□□ 0.87
MTHFRP42898 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MTHFRP42898 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MTHFRP42898 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MTHFRP42898 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFRP42898 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFRP42898 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MTHFRP42898 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MTHFRP42898 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
MTHFRP42898 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MTHFRP42898 AC096733.2-201ENST00000609937 1394 ntBASIC20.51■□□□□ 0.87
MTHFRP42898 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFRP42898 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFRP42898 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFRP42898 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
MTHFRP42898 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 KRT126P-201ENST00000549467 1181 ntBASIC20.51■□□□□ 0.87
MTHFRP42898 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.51■□□□□ 0.87
MTHFRP42898 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
MTHFRP42898 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.51■□□□□ 0.87
MTHFRP42898 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFRP42898 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.51■□□□□ 0.87
MTHFRP42898 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.51■□□□□ 0.87
MTHFRP42898 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTHFRP42898 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 AC018553.1-201ENST00000616682 1458 ntBASIC20.5■□□□□ 0.87
MTHFRP42898 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.5■□□□□ 0.87
MTHFRP42898 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MTHFRP42898 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.5■□□□□ 0.87
MTHFRP42898 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.5■□□□□ 0.87
MTHFRP42898 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.5■□□□□ 0.87
MTHFRP42898 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.5■□□□□ 0.87
MTHFRP42898 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MTHFRP42898 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MTHFRP42898 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTHFRP42898 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MTHFRP42898 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
MTHFRP42898 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFRP42898 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFRP42898 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.49■□□□□ 0.87
MTHFRP42898 AC009947.2-201ENST00000444014 672 ntBASIC20.49■□□□□ 0.87
MTHFRP42898 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.49■□□□□ 0.87
MTHFRP42898 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MTHFRP42898 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.49■□□□□ 0.87
MTHFRP42898 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MTHFRP42898 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.49■□□□□ 0.87
MTHFRP42898 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFRP42898 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFRP42898 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFRP42898 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MTHFRP42898 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MTHFRP42898 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MTHFRP42898 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.48■□□□□ 0.87
MTHFRP42898 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
MTHFRP42898 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MTHFRP42898 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 AL512604.3-201ENST00000569583 964 ntBASIC20.48■□□□□ 0.87
MTHFRP42898 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.48■□□□□ 0.87
MTHFRP42898 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 AL121956.5-201ENST00000625261 221 ntBASIC20.48■□□□□ 0.87
MTHFRP42898 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.48■□□□□ 0.87
MTHFRP42898 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MTHFRP42898 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms