Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.04■□□□□ 0.64
EPHA3P29320 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 MFSD11-216ENST00000590393 1141 ntBASIC19.04■□□□□ 0.64
EPHA3P29320 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.04■□□□□ 0.64
EPHA3P29320 AC007613.1-201ENST00000572811 2597 ntBASIC19.04■□□□□ 0.64
EPHA3P29320 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
EPHA3P29320 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
EPHA3P29320 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA3P29320 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
EPHA3P29320 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
EPHA3P29320 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.03■□□□□ 0.64
EPHA3P29320 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
EPHA3P29320 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.03■□□□□ 0.64
EPHA3P29320 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.03■□□□□ 0.64
EPHA3P29320 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
EPHA3P29320 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 KRT18P68-201ENST00000392293 1000 ntBASIC19.03■□□□□ 0.64
EPHA3P29320 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.03■□□□□ 0.64
EPHA3P29320 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.03■□□□□ 0.64
EPHA3P29320 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
EPHA3P29320 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA3P29320 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.03■□□□□ 0.64
EPHA3P29320 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.02■□□□□ 0.64
EPHA3P29320 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA3P29320 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA3P29320 AL161938.1-201ENST00000569833 2180 ntBASIC19.02■□□□□ 0.64
EPHA3P29320 AL049812.1-201ENST00000432563 2267 ntBASIC19.02■□□□□ 0.64
EPHA3P29320 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA3P29320 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA3P29320 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
EPHA3P29320 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.02■□□□□ 0.64
EPHA3P29320 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.02■□□□□ 0.64
EPHA3P29320 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA3P29320 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA3P29320 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
EPHA3P29320 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
EPHA3P29320 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EPHA3P29320 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
EPHA3P29320 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.01■□□□□ 0.63
EPHA3P29320 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
EPHA3P29320 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.01■□□□□ 0.63
EPHA3P29320 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.01■□□□□ 0.63
EPHA3P29320 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 ZNRF2P3-201ENST00000424200 374 ntBASIC19.01■□□□□ 0.63
EPHA3P29320 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
EPHA3P29320 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.01■□□□□ 0.63
EPHA3P29320 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.01■□□□□ 0.63
EPHA3P29320 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.01■□□□□ 0.63
EPHA3P29320 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.01■□□□□ 0.63
EPHA3P29320 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.01■□□□□ 0.63
EPHA3P29320 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.01■□□□□ 0.63
EPHA3P29320 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
EPHA3P29320 NTF6G-201ENST00000591094 616 ntBASIC19.01■□□□□ 0.63
EPHA3P29320 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
EPHA3P29320 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.01■□□□□ 0.63
EPHA3P29320 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
EPHA3P29320 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA3P29320 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19■□□□□ 0.63
EPHA3P29320 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19■□□□□ 0.63
EPHA3P29320 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHA3P29320 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19■□□□□ 0.63
EPHA3P29320 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19■□□□□ 0.63
EPHA3P29320 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms