Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GDF1P27539 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.79■□□□□ 0.44
GDF1P27539 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.78■□□□□ 0.44
GDF1P27539 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.78■□□□□ 0.44
GDF1P27539 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
GDF1P27539 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GDF1P27539 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.78■□□□□ 0.44
GDF1P27539 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.78■□□□□ 0.44
GDF1P27539 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GDF1P27539 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.78■□□□□ 0.44
GDF1P27539 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.78■□□□□ 0.44
GDF1P27539 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
GDF1P27539 CR392000.1-201ENST00000624770 1228 ntBASIC17.78■□□□□ 0.44
GDF1P27539 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF1P27539 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GDF1P27539 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GDF1P27539 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.77■□□□□ 0.44
GDF1P27539 TMEM179-206ENST00000616017 1645 ntBASIC17.77■□□□□ 0.44
GDF1P27539 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 AC099778.1-201ENST00000568593 1911 ntBASIC17.77■□□□□ 0.44
GDF1P27539 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GDF1P27539 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GDF1P27539 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 KSR1P1-201ENST00000446298 240 ntBASIC17.77■□□□□ 0.44
GDF1P27539 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.77■□□□□ 0.44
GDF1P27539 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.77■□□□□ 0.44
GDF1P27539 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.77■□□□□ 0.44
GDF1P27539 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
GDF1P27539 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.77■□□□□ 0.44
GDF1P27539 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.77■□□□□ 0.44
GDF1P27539 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDF1P27539 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.77■□□□□ 0.43
GDF1P27539 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GDF1P27539 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GDF1P27539 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GDF1P27539 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GDF1P27539 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.77■□□□□ 0.43
GDF1P27539 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.77■□□□□ 0.43
GDF1P27539 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.76■□□□□ 0.43
GDF1P27539 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.76■□□□□ 0.43
GDF1P27539 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 KRT16P1-201ENST00000399124 1418 ntBASIC17.76■□□□□ 0.43
GDF1P27539 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.76■□□□□ 0.43
GDF1P27539 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.76■□□□□ 0.43
GDF1P27539 AP003071.4-201ENST00000562276 1284 ntBASIC17.76■□□□□ 0.43
GDF1P27539 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GDF1P27539 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.76■□□□□ 0.43
GDF1P27539 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDF1P27539 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.76■□□□□ 0.43
GDF1P27539 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.75■□□□□ 0.43
GDF1P27539 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GDF1P27539 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.75■□□□□ 0.43
GDF1P27539 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GDF1P27539 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDF1P27539 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms