Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.56■□□□□ 0.24
COL8A2P25067 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.55■□□□□ 0.24
COL8A2P25067 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.55■□□□□ 0.24
COL8A2P25067 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
COL8A2P25067 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.55■□□□□ 0.24
COL8A2P25067 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 ECEL1P3-201ENST00000427961 737 ntBASIC16.55■□□□□ 0.24
COL8A2P25067 TUBB8P6-201ENST00000436895 1288 ntBASIC16.55■□□□□ 0.24
COL8A2P25067 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.55■□□□□ 0.24
COL8A2P25067 YBX1P10-201ENST00000444752 975 ntBASIC16.55■□□□□ 0.24
COL8A2P25067 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
COL8A2P25067 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.55■□□□□ 0.24
COL8A2P25067 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
COL8A2P25067 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.55■□□□□ 0.24
COL8A2P25067 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.55■□□□□ 0.24
COL8A2P25067 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL8A2P25067 LINC01521-201ENST00000504184 1943 ntBASIC16.55■□□□□ 0.24
COL8A2P25067 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.54■□□□□ 0.24
COL8A2P25067 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
COL8A2P25067 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.54■□□□□ 0.24
COL8A2P25067 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 AFG3L1P-217ENST00000557444 2447 ntBASIC16.54■□□□□ 0.24
COL8A2P25067 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
COL8A2P25067 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.54■□□□□ 0.24
COL8A2P25067 NIFKP9-201ENST00000419265 221 ntBASIC16.54■□□□□ 0.24
COL8A2P25067 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL8A2P25067 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.54■□□□□ 0.24
COL8A2P25067 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.54■□□□□ 0.24
COL8A2P25067 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.54■□□□□ 0.24
COL8A2P25067 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COL8A2P25067 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COL8A2P25067 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL8A2P25067 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.53■□□□□ 0.24
COL8A2P25067 GABARAPL3-202ENST00000624044 1851 ntBASIC16.53■□□□□ 0.24
COL8A2P25067 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.53■□□□□ 0.24
COL8A2P25067 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.53■□□□□ 0.24
COL8A2P25067 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 KSR1P1-201ENST00000446298 240 ntBASIC16.53■□□□□ 0.24
COL8A2P25067 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.53■□□□□ 0.24
COL8A2P25067 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.53■□□□□ 0.24
COL8A2P25067 KRT18P16-201ENST00000510337 1294 ntBASIC16.53■□□□□ 0.24
COL8A2P25067 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.53■□□□□ 0.24
COL8A2P25067 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.53■□□□□ 0.24
COL8A2P25067 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
COL8A2P25067 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL8A2P25067 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
COL8A2P25067 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL8A2P25067 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL8A2P25067 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
COL8A2P25067 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.52■□□□□ 0.24
COL8A2P25067 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 AL162377.1-201ENST00000618844 1793 ntBASIC16.52■□□□□ 0.24
COL8A2P25067 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.52■□□□□ 0.24
COL8A2P25067 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
COL8A2P25067 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 NUDT16P1-203ENST00000513809 620 ntBASIC16.52■□□□□ 0.24
COL8A2P25067 C1QL1P1-201ENST00000568105 661 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms