Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
MSR1P21757 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.3■□□□□ 0.36
MSR1P21757 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.3■□□□□ 0.36
MSR1P21757 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.3■□□□□ 0.36
MSR1P21757 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.3■□□□□ 0.36
MSR1P21757 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.3■□□□□ 0.36
MSR1P21757 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.3■□□□□ 0.36
MSR1P21757 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.3■□□□□ 0.36
MSR1P21757 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.3■□□□□ 0.36
MSR1P21757 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSR1P21757 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.3■□□□□ 0.36
MSR1P21757 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.29■□□□□ 0.36
MSR1P21757 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MSR1P21757 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
MSR1P21757 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.29■□□□□ 0.36
MSR1P21757 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.29■□□□□ 0.36
MSR1P21757 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
MSR1P21757 AC120498.8-201ENST00000614275 531 ntBASIC17.29■□□□□ 0.36
MSR1P21757 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.29■□□□□ 0.36
MSR1P21757 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.29■□□□□ 0.36
MSR1P21757 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.29■□□□□ 0.36
MSR1P21757 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSR1P21757 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
MSR1P21757 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.28■□□□□ 0.36
MSR1P21757 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MSR1P21757 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MSR1P21757 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MSR1P21757 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.28■□□□□ 0.36
MSR1P21757 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MSR1P21757 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.28■□□□□ 0.36
MSR1P21757 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.28■□□□□ 0.36
MSR1P21757 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.28■□□□□ 0.36
MSR1P21757 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.28■□□□□ 0.36
MSR1P21757 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.28■□□□□ 0.36
MSR1P21757 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MSR1P21757 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.28■□□□□ 0.36
MSR1P21757 AC008687.6-201ENST00000596318 630 ntBASIC17.28■□□□□ 0.36
MSR1P21757 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.28■□□□□ 0.36
MSR1P21757 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.28■□□□□ 0.36
MSR1P21757 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSR1P21757 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MSR1P21757 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.28■□□□□ 0.36
MSR1P21757 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSR1P21757 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MSR1P21757 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSR1P21757 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MSR1P21757 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSR1P21757 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSR1P21757 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSR1P21757 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSR1P21757 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.27■□□□□ 0.36
MSR1P21757 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MSR1P21757 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.27■□□□□ 0.36
MSR1P21757 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms