Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB4AP20338 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RAB4AP20338 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB4AP20338 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB4AP20338 AL390961.4-201ENST00000623958 2535 ntBASIC14.99□□□□□ -0.01
RAB4AP20338 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB4AP20338 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB4AP20338 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB4AP20338 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB4AP20338 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB4AP20338 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB4AP20338 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB4AP20338 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB4AP20338 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RAB4AP20338 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB4AP20338 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.98□□□□□ -0.01
RAB4AP20338 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RAB4AP20338 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RAB4AP20338 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB4AP20338 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RAB4AP20338 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAB4AP20338 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB4AP20338 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB4AP20338 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB4AP20338 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RAB4AP20338 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB4AP20338 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB4AP20338 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB4AP20338 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.97□□□□□ -0.01
RAB4AP20338 AC009053.2-201ENST00000563701 2365 ntBASIC14.97□□□□□ -0.01
RAB4AP20338 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB4AP20338 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB4AP20338 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB4AP20338 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB4AP20338 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
RAB4AP20338 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB4AP20338 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB4AP20338 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RAB4AP20338 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RAB4AP20338 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RAB4AP20338 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 TSPY9P-201ENST00000440215 945 ntBASIC14.96□□□□□ -0.01
RAB4AP20338 TSPY11P-201ENST00000442607 1045 ntBASIC14.96□□□□□ -0.01
RAB4AP20338 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 MIR6724-1-201ENST00000616420 92 ntBASIC14.96□□□□□ -0.01
RAB4AP20338 MIR6724-2-201ENST00000616483 92 ntBASIC14.96□□□□□ -0.01
RAB4AP20338 MIR6724-4-201ENST00000617390 92 ntBASIC14.96□□□□□ -0.01
RAB4AP20338 MIR6724-3-201ENST00000622482 92 ntBASIC14.96□□□□□ -0.01
RAB4AP20338 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB4AP20338 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.96□□□□□ -0.01
RAB4AP20338 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB4AP20338 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB4AP20338 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAB4AP20338 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB4AP20338 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB4AP20338 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB4AP20338 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB4AP20338 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB4AP20338 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms