Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNFRSF1BP20333 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 BID-214ENST00000617586 542 ntTSL 5 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF1BP20333 NEFHP1-201ENST00000412845 2629 ntBASIC18.19■□□□□ 0.5
TNFRSF1BP20333 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 AC007322.1-201ENST00000426983 750 ntBASIC18.18■□□□□ 0.5
TNFRSF1BP20333 AC026271.2-201ENST00000428091 497 ntBASIC18.18■□□□□ 0.5
TNFRSF1BP20333 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 AL589743.5-201ENST00000616611 1050 ntBASIC18.18■□□□□ 0.5
TNFRSF1BP20333 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 AIRN-201ENST00000601203 4374 ntBASIC18.18■□□□□ 0.5
TNFRSF1BP20333 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF1BP20333 LINC01465-201ENST00000408887 1940 ntBASIC18.17■□□□□ 0.5
TNFRSF1BP20333 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 AC023632.3-201ENST00000521633 145 ntBASIC18.17■□□□□ 0.5
TNFRSF1BP20333 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF1BP20333 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 AC231657.2-201ENST00000624556 255 ntBASIC18.16■□□□□ 0.5
TNFRSF1BP20333 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF1BP20333 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TNFRSF1BP20333 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms