Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPN1P18031 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTPN1P18031 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 AC073195.1-201ENST00000607241 877 ntBASIC20.78■□□□□ 0.92
PTPN1P18031 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTPN1P18031 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN1P18031 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PTPN1P18031 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PTPN1P18031 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN1P18031 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN1P18031 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN1P18031 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN1P18031 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
PTPN1P18031 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PTPN1P18031 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PTPN1P18031 TSPY7P-201ENST00000431358 1114 ntBASIC20.77■□□□□ 0.92
PTPN1P18031 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN1P18031 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPN1P18031 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
PTPN1P18031 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN1P18031 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN1P18031 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN1P18031 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN1P18031 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
PTPN1P18031 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PTPN1P18031 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PTPN1P18031 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN1P18031 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN1P18031 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PTPN1P18031 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN1P18031 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
PTPN1P18031 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PTPN1P18031 NIFKP9-201ENST00000419265 221 ntBASIC20.76■□□□□ 0.91
PTPN1P18031 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPN1P18031 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN1P18031 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.76■□□□□ 0.91
PTPN1P18031 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPN1P18031 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN1P18031 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN1P18031 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN1P18031 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN1P18031 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPN1P18031 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN1P18031 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN1P18031 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PTPN1P18031 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PTPN1P18031 FAM197Y1-201ENST00000421178 764 ntBASIC20.75■□□□□ 0.91
PTPN1P18031 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PTPN1P18031 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN1P18031 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN1P18031 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.75■□□□□ 0.91
PTPN1P18031 CD177P1-201ENST00000606252 935 ntBASIC20.75■□□□□ 0.91
PTPN1P18031 KRT8P8-201ENST00000434750 1448 ntBASIC20.75■□□□□ 0.91
PTPN1P18031 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPN1P18031 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN1P18031 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PTPN1P18031 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PTPN1P18031 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN1P18031 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN1P18031 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPN1P18031 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPN1P18031 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN1P18031 KSR1P1-201ENST00000446298 240 ntBASIC20.74■□□□□ 0.91
PTPN1P18031 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPN1P18031 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN1P18031 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN1P18031 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN1P18031 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN1P18031 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN1P18031 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN1P18031 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms