Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CROCCP3-202ENST00000420820 1947 ntBASIC16.6■□□□□ 0.25
HIST1H1DP16402 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 MIR638-201ENST00000385237 100 ntBASIC16.6■□□□□ 0.25
HIST1H1DP16402 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 AC023632.3-201ENST00000521633 145 ntBASIC16.6■□□□□ 0.25
HIST1H1DP16402 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H1DP16402 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 KRT18P11-201ENST00000435214 1283 ntBASIC16.59■□□□□ 0.25
HIST1H1DP16402 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.59■□□□□ 0.25
HIST1H1DP16402 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H1DP16402 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H1DP16402 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H1DP16402 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H1DP16402 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H1DP16402 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H1DP16402 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H1DP16402 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H1DP16402 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.58■□□□□ 0.25
HIST1H1DP16402 AL161938.1-201ENST00000569833 2180 ntBASIC16.58■□□□□ 0.25
HIST1H1DP16402 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HIST1H1DP16402 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H1DP16402 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H1DP16402 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.58■□□□□ 0.24
HIST1H1DP16402 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H1DP16402 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HIST1H1DP16402 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H1DP16402 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H1DP16402 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H1DP16402 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H1DP16402 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H1DP16402 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H1DP16402 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H1DP16402 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H1DP16402 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H1DP16402 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H1DP16402 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIST1H1DP16402 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms