Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.61■■□□□ 1.37
CHGBP05060 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
CHGBP05060 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CHGBP05060 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.6■■□□□ 1.37
CHGBP05060 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.6■■□□□ 1.37
CHGBP05060 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.6■■□□□ 1.37
CHGBP05060 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.6■■□□□ 1.37
CHGBP05060 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.6■■□□□ 1.37
CHGBP05060 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.6■■□□□ 1.37
CHGBP05060 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.6■■□□□ 1.37
CHGBP05060 AC113410.3-201ENST00000623366 203 ntBASIC23.6■■□□□ 1.37
CHGBP05060 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CHGBP05060 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.6■■□□□ 1.37
CHGBP05060 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHGBP05060 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CHGBP05060 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 TSPY7P-201ENST00000431358 1114 ntBASIC23.59■■□□□ 1.37
CHGBP05060 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 TSPY15P-201ENST00000457163 923 ntBASIC23.59■■□□□ 1.37
CHGBP05060 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CHGBP05060 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.59■■□□□ 1.37
CHGBP05060 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.59■■□□□ 1.37
CHGBP05060 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.59■■□□□ 1.37
CHGBP05060 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.59■■□□□ 1.37
CHGBP05060 AC233702.5-201ENST00000584107 538 ntBASIC23.59■■□□□ 1.37
CHGBP05060 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHGBP05060 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.59■■□□□ 1.37
CHGBP05060 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.59■■□□□ 1.37
CHGBP05060 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHGBP05060 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.58■■□□□ 1.37
CHGBP05060 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.58■■□□□ 1.37
CHGBP05060 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHGBP05060 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.58■■□□□ 1.37
CHGBP05060 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHGBP05060 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHGBP05060 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.58■■□□□ 1.37
CHGBP05060 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.58■■□□□ 1.37
CHGBP05060 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.58■■□□□ 1.37
CHGBP05060 AF186192.3-201ENST00000583427 947 ntBASIC23.58■■□□□ 1.37
CHGBP05060 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.58■■□□□ 1.37
CHGBP05060 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHGBP05060 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
CHGBP05060 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHGBP05060 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
CHGBP05060 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHGBP05060 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.58■■□□□ 1.36
CHGBP05060 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.57■■□□□ 1.36
CHGBP05060 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.57■■□□□ 1.36
CHGBP05060 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.57■■□□□ 1.36
CHGBP05060 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CHGBP05060 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.57■■□□□ 1.36
CHGBP05060 SNORA78-201ENST00000459373 127 ntBASIC23.57■■□□□ 1.36
CHGBP05060 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.57■■□□□ 1.36
CHGBP05060 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.57■■□□□ 1.36
CHGBP05060 RARRES2P10-201ENST00000564312 460 ntBASIC23.57■■□□□ 1.36
CHGBP05060 C1QL1P1-201ENST00000568105 661 ntBASIC23.57■■□□□ 1.36
CHGBP05060 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.57■■□□□ 1.36
CHGBP05060 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
CHGBP05060 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHGBP05060 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CHGBP05060 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms