Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ATP1A1P05023 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP1A1P05023 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP1A1P05023 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP1A1P05023 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP1A1P05023 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP1A1P05023 AL161938.1-201ENST00000569833 2180 ntBASIC20.83■□□□□ 0.92
ATP1A1P05023 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP1A1P05023 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP1A1P05023 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP1A1P05023 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP1A1P05023 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ATP1A1P05023 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP1A1P05023 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.82■□□□□ 0.92
ATP1A1P05023 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP1A1P05023 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP1A1P05023 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP1A1P05023 KRT8P20-201ENST00000423953 1409 ntBASIC20.82■□□□□ 0.92
ATP1A1P05023 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.82■□□□□ 0.92
ATP1A1P05023 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP1A1P05023 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP1A1P05023 AC073111.5-205ENST00000641717 521 ntBASIC20.82■□□□□ 0.92
ATP1A1P05023 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP1A1P05023 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP1A1P05023 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP1A1P05023 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATP1A1P05023 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP1A1P05023 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ATP1A1P05023 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
ATP1A1P05023 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 CDCA4P2-201ENST00000441182 718 ntBASIC20.81■□□□□ 0.92
ATP1A1P05023 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ATP1A1P05023 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATP1A1P05023 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.81■□□□□ 0.92
ATP1A1P05023 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.81■□□□□ 0.92
ATP1A1P05023 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
ATP1A1P05023 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP1A1P05023 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP1A1P05023 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATP1A1P05023 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
ATP1A1P05023 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATP1A1P05023 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP1A1P05023 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATP1A1P05023 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP1A1P05023 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP1A1P05023 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP1A1P05023 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 AC016405.3-201ENST00000607710 860 ntBASIC20.8■□□□□ 0.92
ATP1A1P05023 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP1A1P05023 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
ATP1A1P05023 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP1A1P05023 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP1A1P05023 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ATP1A1P05023 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ATP1A1P05023 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP1A1P05023 AC009113.1-201ENST00000570267 2443 ntBASIC20.79■□□□□ 0.92
ATP1A1P05023 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP1A1P05023 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP1A1P05023 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP1A1P05023 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP1A1P05023 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ATP1A1P05023 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms