Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.67■■□□□ 1.38
COL1A1P02452 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 C2orf69P3-201ENST00000565542 1120 ntBASIC23.67■■□□□ 1.38
COL1A1P02452 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.67■■□□□ 1.38
COL1A1P02452 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A1P02452 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.66■■□□□ 1.38
COL1A1P02452 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.66■■□□□ 1.38
COL1A1P02452 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.66■■□□□ 1.38
COL1A1P02452 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.66■■□□□ 1.38
COL1A1P02452 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
COL1A1P02452 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.66■■□□□ 1.38
COL1A1P02452 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
COL1A1P02452 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.66■■□□□ 1.38
COL1A1P02452 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.66■■□□□ 1.38
COL1A1P02452 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A1P02452 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
COL1A1P02452 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.65■■□□□ 1.38
COL1A1P02452 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.65■■□□□ 1.38
COL1A1P02452 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
COL1A1P02452 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.65■■□□□ 1.38
COL1A1P02452 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
COL1A1P02452 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
COL1A1P02452 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A1P02452 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL1A1P02452 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.64■■□□□ 1.38
COL1A1P02452 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.64■■□□□ 1.38
COL1A1P02452 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL1A1P02452 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
COL1A1P02452 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.64■■□□□ 1.38
COL1A1P02452 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.64■■□□□ 1.38
COL1A1P02452 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL1A1P02452 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.64■■□□□ 1.37
COL1A1P02452 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.64■■□□□ 1.37
COL1A1P02452 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL1A1P02452 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
COL1A1P02452 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 TCF3P1-201ENST00000423021 1937 ntBASIC23.63■■□□□ 1.37
COL1A1P02452 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
COL1A1P02452 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 NTF6B-201ENST00000591913 560 ntBASIC23.63■■□□□ 1.37
COL1A1P02452 AC009237.14-201ENST00000609975 1594 ntBASIC23.63■■□□□ 1.37
COL1A1P02452 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.63■■□□□ 1.37
COL1A1P02452 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.63■■□□□ 1.37
COL1A1P02452 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.63■■□□□ 1.37
COL1A1P02452 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A1P02452 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A1P02452 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 AC010203.1-204ENST00000548782 407 ntBASIC23.62■■□□□ 1.37
COL1A1P02452 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 AC006011.2-201ENST00000621313 1158 ntBASIC23.62■■□□□ 1.37
COL1A1P02452 AC131212.4-201ENST00000623606 975 ntBASIC23.62■■□□□ 1.37
COL1A1P02452 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
COL1A1P02452 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A1P02452 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 LINC01006-201ENST00000333319 2292 ntBASIC23.62■■□□□ 1.37
COL1A1P02452 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A1P02452 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
COL1A1P02452 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A1P02452 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.62■■□□□ 1.37
COL1A1P02452 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A1P02452 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A1P02452 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
COL1A1P02452 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.62■■□□□ 1.37
COL1A1P02452 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 INGX-201ENST00000359239 846 ntBASIC23.62■■□□□ 1.37
COL1A1P02452 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.62■■□□□ 1.37
COL1A1P02452 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms