Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.52■□□□□ 0.07
IFNA1P01562 AC090164.3-201ENST00000610780 2143 ntBASIC15.52■□□□□ 0.07
IFNA1P01562 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IFNA1P01562 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.52■□□□□ 0.07
IFNA1P01562 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IFNA1P01562 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
IFNA1P01562 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
IFNA1P01562 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
IFNA1P01562 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFNA1P01562 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFNA1P01562 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.51■□□□□ 0.07
IFNA1P01562 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFNA1P01562 AC061975.6-201ENST00000579045 1553 ntBASIC15.51■□□□□ 0.07
IFNA1P01562 AC009113.1-201ENST00000570267 2443 ntBASIC15.51■□□□□ 0.07
IFNA1P01562 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFNA1P01562 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.51■□□□□ 0.07
IFNA1P01562 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.51■□□□□ 0.07
IFNA1P01562 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFNA1P01562 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.51■□□□□ 0.07
IFNA1P01562 AL033527.3-201ENST00000566366 1196 ntBASIC15.51■□□□□ 0.07
IFNA1P01562 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.51■□□□□ 0.07
IFNA1P01562 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.51■□□□□ 0.07
IFNA1P01562 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
IFNA1P01562 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
IFNA1P01562 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.51■□□□□ 0.07
IFNA1P01562 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.51■□□□□ 0.07
IFNA1P01562 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
IFNA1P01562 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFNA1P01562 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFNA1P01562 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
IFNA1P01562 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IFNA1P01562 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.5■□□□□ 0.07
IFNA1P01562 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IFNA1P01562 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.5■□□□□ 0.07
IFNA1P01562 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
IFNA1P01562 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.5■□□□□ 0.07
IFNA1P01562 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IFNA1P01562 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.5■□□□□ 0.07
IFNA1P01562 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
IFNA1P01562 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.5■□□□□ 0.07
IFNA1P01562 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
IFNA1P01562 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
IFNA1P01562 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.5■□□□□ 0.07
IFNA1P01562 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IFNA1P01562 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 AC104581.1-202ENST00000635932 2618 ntBASIC15.49■□□□□ 0.07
IFNA1P01562 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.49■□□□□ 0.07
IFNA1P01562 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.49■□□□□ 0.07
IFNA1P01562 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
IFNA1P01562 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.49■□□□□ 0.07
IFNA1P01562 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.49■□□□□ 0.07
IFNA1P01562 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 AC116050.2-201ENST00000612102 1779 ntBASIC15.49■□□□□ 0.07
IFNA1P01562 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.49■□□□□ 0.07
IFNA1P01562 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IFNA1P01562 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.48■□□□□ 0.07
IFNA1P01562 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 FZD10-202ENST00000539839 3282 ntBASIC15.48■□□□□ 0.07
IFNA1P01562 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms