Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.44■□□□□ 0.54
CLPTM1O96005 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CLPTM1O96005 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPTM1O96005 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPTM1O96005 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPTM1O96005 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPTM1O96005 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLPTM1O96005 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
CLPTM1O96005 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLPTM1O96005 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 KRT18P14-201ENST00000534205 1250 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4L2-201ENST00000561772 1275 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 TERF1P2-201ENST00000583350 1212 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
CLPTM1O96005 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4L6-201ENST00000626483 1275 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4L1-201ENST00000627662 1275 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4L8-201ENST00000629013 1275 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4L3-201ENST00000630187 1275 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4L7-201ENST00000630678 1275 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 DUX4L5-201ENST00000630834 1275 ntBASIC18.43■□□□□ 0.54
CLPTM1O96005 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.43■□□□□ 0.54
CLPTM1O96005 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPTM1O96005 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPTM1O96005 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPTM1O96005 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPTM1O96005 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPTM1O96005 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPTM1O96005 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLPTM1O96005 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPTM1O96005 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPTM1O96005 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPTM1O96005 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPTM1O96005 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CLPTM1O96005 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CLPTM1O96005 AC034268.1-201ENST00000441047 882 ntBASIC18.42■□□□□ 0.54
CLPTM1O96005 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPTM1O96005 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLPTM1O96005 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPTM1O96005 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CLPTM1O96005 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPTM1O96005 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPTM1O96005 AC068880.1-201ENST00000507289 2297 ntBASIC18.42■□□□□ 0.54
CLPTM1O96005 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLPTM1O96005 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.41■□□□□ 0.54
CLPTM1O96005 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLPTM1O96005 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.41■□□□□ 0.54
CLPTM1O96005 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLPTM1O96005 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.41■□□□□ 0.54
CLPTM1O96005 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.41■□□□□ 0.54
CLPTM1O96005 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.41■□□□□ 0.54
CLPTM1O96005 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.41■□□□□ 0.54
CLPTM1O96005 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLPTM1O96005 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPTM1O96005 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLPTM1O96005 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLPTM1O96005 AC005224.4-201ENST00000583262 1652 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms