Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN1O95832 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN1O95832 FSCN1P1-201ENST00000568912 1481 ntBASIC17.5■□□□□ 0.39
CLDN1O95832 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN1O95832 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN1O95832 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLDN1O95832 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN1O95832 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLDN1O95832 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN1O95832 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLDN1O95832 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN1O95832 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.49■□□□□ 0.39
CLDN1O95832 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN1O95832 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN1O95832 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN1O95832 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CLDN1O95832 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN1O95832 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN1O95832 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN1O95832 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLDN1O95832 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLDN1O95832 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN1O95832 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN1O95832 FAM86EP-206ENST00000510506 987 ntBASIC17.48■□□□□ 0.39
CLDN1O95832 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN1O95832 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN1O95832 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN1O95832 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN1O95832 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN1O95832 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLDN1O95832 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN1O95832 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN1O95832 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLDN1O95832 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN1O95832 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLDN1O95832 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN1O95832 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.47■□□□□ 0.39
CLDN1O95832 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CLDN1O95832 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 FEM1AP4-201ENST00000443167 1987 ntBASIC17.47■□□□□ 0.39
CLDN1O95832 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN1O95832 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN1O95832 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CLDN1O95832 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLDN1O95832 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLDN1O95832 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN1O95832 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 IER3-202ENST00000376377 1350 ntBASIC17.46■□□□□ 0.39
CLDN1O95832 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN1O95832 TSPY5P-201ENST00000426936 936 ntBASIC17.46■□□□□ 0.39
CLDN1O95832 FAM207BP-201ENST00000447172 505 ntBASIC17.46■□□□□ 0.39
CLDN1O95832 YBX1P2-201ENST00000489612 999 ntBASIC17.46■□□□□ 0.39
CLDN1O95832 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN1O95832 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN1O95832 CLEC4GP1-201ENST00000596555 870 ntBASIC17.46■□□□□ 0.39
CLDN1O95832 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN1O95832 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN1O95832 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN1O95832 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN1O95832 AC138932.1-201ENST00000534164 6830 ntBASIC17.46■□□□□ 0.39
CLDN1O95832 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN1O95832 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN1O95832 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN1O95832 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms