Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 AC139713.2-201ENST00000641328 2723 ntBASIC16.39■□□□□ 0.21
SIX6O95475 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SIX6O95475 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 UNC93B8-201ENST00000511903 705 ntBASIC16.39■□□□□ 0.21
SIX6O95475 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SIX6O95475 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.39■□□□□ 0.21
SIX6O95475 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.39■□□□□ 0.21
SIX6O95475 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.39■□□□□ 0.21
SIX6O95475 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.39■□□□□ 0.21
SIX6O95475 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX6O95475 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 BICD1-207ENST00000551848 1962 ntBASIC16.38■□□□□ 0.21
SIX6O95475 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
SIX6O95475 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.38■□□□□ 0.21
SIX6O95475 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX6O95475 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX6O95475 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX6O95475 AC067852.2-201ENST00000590513 2313 ntBASIC16.38■□□□□ 0.21
SIX6O95475 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.38■□□□□ 0.21
SIX6O95475 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.38■□□□□ 0.21
SIX6O95475 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 AC012354.3-201ENST00000623734 483 ntBASIC16.38■□□□□ 0.21
SIX6O95475 AC136469.2-201ENST00000623944 1028 ntBASIC16.38■□□□□ 0.21
SIX6O95475 AC099398.1-201ENST00000567919 2776 ntBASIC16.38■□□□□ 0.21
SIX6O95475 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SIX6O95475 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SIX6O95475 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX6O95475 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SIX6O95475 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SIX6O95475 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
SIX6O95475 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.37■□□□□ 0.21
SIX6O95475 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX6O95475 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX6O95475 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX6O95475 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX6O95475 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SIX6O95475 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX6O95475 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX6O95475 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX6O95475 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 AC245052.3-201ENST00000450182 901 ntBASIC16.36■□□□□ 0.21
SIX6O95475 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX6O95475 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SIX6O95475 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms