Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF253O75346 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF253O75346 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF253O75346 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF253O75346 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF253O75346 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF253O75346 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF253O75346 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF253O75346 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF253O75346 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF253O75346 OR6D1P-202ENST00000641007 5290 ntBASIC15.22■□□□□ 0.03
ZNF253O75346 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF253O75346 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF253O75346 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 PKD1P1-201ENST00000458669 6805 ntBASIC15.22■□□□□ 0.03
ZNF253O75346 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF253O75346 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF253O75346 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF253O75346 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF253O75346 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
ZNF253O75346 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ZNF253O75346 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF253O75346 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ZNF253O75346 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF253O75346 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF253O75346 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF253O75346 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF253O75346 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF253O75346 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF253O75346 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZNF253O75346 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF253O75346 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF253O75346 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF253O75346 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF253O75346 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF253O75346 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ZNF253O75346 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF253O75346 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ZNF253O75346 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF253O75346 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF253O75346 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
ZNF253O75346 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF253O75346 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF253O75346 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF253O75346 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.2■□□□□ 0.02
ZNF253O75346 AL591742.1-201ENST00000604433 565 ntBASIC15.2■□□□□ 0.02
ZNF253O75346 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.2■□□□□ 0.02
ZNF253O75346 MYCNOS-205ENST00000641950 531 ntBASIC15.2■□□□□ 0.02
ZNF253O75346 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF253O75346 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF253O75346 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms