Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.29■■□□□ 1
EXTL3O43909 RPS2P4-201ENST00000476944 856 ntBASIC21.29■■□□□ 1
EXTL3O43909 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.29■■□□□ 1
EXTL3O43909 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.29■■□□□ 1
EXTL3O43909 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.29■■□□□ 1
EXTL3O43909 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.29■■□□□ 1
EXTL3O43909 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.29■■□□□ 1
EXTL3O43909 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.29■■□□□ 1
EXTL3O43909 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EXTL3O43909 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
EXTL3O43909 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.29■■□□□ 1
EXTL3O43909 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.28■■□□□ 1
EXTL3O43909 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
EXTL3O43909 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 TREX1-205ENST00000625293 1783 ntBASIC21.28■■□□□ 1
EXTL3O43909 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.28■■□□□ 1
EXTL3O43909 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
EXTL3O43909 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.28■■□□□ 1
EXTL3O43909 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.28■■□□□ 1
EXTL3O43909 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.28■■□□□ 1
EXTL3O43909 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.28■■□□□ 1
EXTL3O43909 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.28■■□□□ 1
EXTL3O43909 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.28■■□□□ 1
EXTL3O43909 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
EXTL3O43909 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 KRT8P8-201ENST00000434750 1448 ntBASIC21.28■■□□□ 1
EXTL3O43909 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.28■■□□□ 1
EXTL3O43909 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.28■■□□□ 1
EXTL3O43909 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.28■■□□□ 1
EXTL3O43909 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EXTL3O43909 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.27■■□□□ 1
EXTL3O43909 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.27■■□□□ 1
EXTL3O43909 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXTL3O43909 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EXTL3O43909 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.27■■□□□ 1
EXTL3O43909 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.27■■□□□ 1
EXTL3O43909 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.27■■□□□ 1
EXTL3O43909 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
EXTL3O43909 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.27■■□□□ 1
EXTL3O43909 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.27■■□□□ 1
EXTL3O43909 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.27■■□□□ 1
EXTL3O43909 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
EXTL3O43909 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.27■■□□□ 1
EXTL3O43909 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
EXTL3O43909 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
EXTL3O43909 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
EXTL3O43909 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
EXTL3O43909 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
EXTL3O43909 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
EXTL3O43909 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
EXTL3O43909 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
EXTL3O43909 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.26■□□□□ 0.99
EXTL3O43909 UBE2SP1-201ENST00000450587 669 ntBASIC21.26■□□□□ 0.99
EXTL3O43909 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.26■□□□□ 0.99
EXTL3O43909 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.26■□□□□ 0.99
EXTL3O43909 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.26■□□□□ 0.99
EXTL3O43909 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
EXTL3O43909 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.26■□□□□ 0.99
EXTL3O43909 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.26■□□□□ 0.99
EXTL3O43909 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
EXTL3O43909 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EXTL3O43909 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
EXTL3O43909 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.25■□□□□ 0.99
EXTL3O43909 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EXTL3O43909 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.25■□□□□ 0.99
EXTL3O43909 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
EXTL3O43909 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EXTL3O43909 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.25■□□□□ 0.99
EXTL3O43909 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.25■□□□□ 0.99
EXTL3O43909 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.25■□□□□ 0.99
EXTL3O43909 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EXTL3O43909 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.25■□□□□ 0.99
EXTL3O43909 C1QL1P1-201ENST00000568105 661 ntBASIC21.25■□□□□ 0.99
EXTL3O43909 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.25■□□□□ 0.99
EXTL3O43909 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms