Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ACTN4O43707 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.98■■□□□ 1.11
ACTN4O43707 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ACTN4O43707 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ACTN4O43707 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.98■■□□□ 1.11
ACTN4O43707 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ACTN4O43707 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.98■■□□□ 1.11
ACTN4O43707 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.98■■□□□ 1.11
ACTN4O43707 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.98■■□□□ 1.11
ACTN4O43707 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.98■■□□□ 1.11
ACTN4O43707 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.98■■□□□ 1.11
ACTN4O43707 AC083880.1-201ENST00000608266 535 ntBASIC21.98■■□□□ 1.11
ACTN4O43707 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ACTN4O43707 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
ACTN4O43707 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
ACTN4O43707 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.97■■□□□ 1.11
ACTN4O43707 RPS2P52-201ENST00000469610 820 ntBASIC21.97■■□□□ 1.11
ACTN4O43707 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.97■■□□□ 1.11
ACTN4O43707 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.97■■□□□ 1.11
ACTN4O43707 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.97■■□□□ 1.11
ACTN4O43707 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.97■■□□□ 1.11
ACTN4O43707 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.97■■□□□ 1.11
ACTN4O43707 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.97■■□□□ 1.11
ACTN4O43707 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
ACTN4O43707 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.97■■□□□ 1.11
ACTN4O43707 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.97■■□□□ 1.11
ACTN4O43707 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ACTN4O43707 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ACTN4O43707 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.96■■□□□ 1.11
ACTN4O43707 TNXA-203ENST00000507684 2038 ntBASIC21.96■■□□□ 1.11
ACTN4O43707 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.96■■□□□ 1.11
ACTN4O43707 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.96■■□□□ 1.11
ACTN4O43707 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.96■■□□□ 1.11
ACTN4O43707 HLA-B-256ENST00000639848 1089 ntBASIC21.96■■□□□ 1.11
ACTN4O43707 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ACTN4O43707 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.96■■□□□ 1.11
ACTN4O43707 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ACTN4O43707 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
ACTN4O43707 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
ACTN4O43707 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ACTN4O43707 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ACTN4O43707 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ACTN4O43707 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ACTN4O43707 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ACTN4O43707 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ACTN4O43707 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.95■■□□□ 1.1
ACTN4O43707 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
ACTN4O43707 AC097658.1-201ENST00000475555 843 ntBASIC21.95■■□□□ 1.1
ACTN4O43707 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.95■■□□□ 1.1
ACTN4O43707 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ACTN4O43707 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.95■■□□□ 1.1
ACTN4O43707 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
ACTN4O43707 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
ACTN4O43707 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
ACTN4O43707 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.95■■□□□ 1.1
ACTN4O43707 AC092368.3-202ENST00000574180 1591 ntBASIC21.95■■□□□ 1.1
ACTN4O43707 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ACTN4O43707 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
ACTN4O43707 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ACTN4O43707 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ACTN4O43707 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ACTN4O43707 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.94■■□□□ 1.1
ACTN4O43707 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ACTN4O43707 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ACTN4O43707 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ACTN4O43707 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.94■■□□□ 1.1
ACTN4O43707 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.94■■□□□ 1.1
ACTN4O43707 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ACTN4O43707 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.94■■□□□ 1.1
ACTN4O43707 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.94■■□□□ 1.1
ACTN4O43707 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.94■■□□□ 1.1
ACTN4O43707 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.94■■□□□ 1.1
ACTN4O43707 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.94■■□□□ 1.1
ACTN4O43707 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ACTN4O43707 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.94■■□□□ 1.1
ACTN4O43707 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ACTN4O43707 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.93■■□□□ 1.1
ACTN4O43707 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ACTN4O43707 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ACTN4O43707 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ACTN4O43707 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.93■■□□□ 1.1
ACTN4O43707 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.93■■□□□ 1.1
ACTN4O43707 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms