Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 MIR638-201ENST00000385237 100 ntBASIC19.05■□□□□ 0.64
HDAC3O15379 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.05■□□□□ 0.64
HDAC3O15379 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.05■□□□□ 0.64
HDAC3O15379 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
HDAC3O15379 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.05■□□□□ 0.64
HDAC3O15379 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.05■□□□□ 0.64
HDAC3O15379 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.05■□□□□ 0.64
HDAC3O15379 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.05■□□□□ 0.64
HDAC3O15379 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
HDAC3O15379 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HDAC3O15379 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
HDAC3O15379 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HDAC3O15379 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.04■□□□□ 0.64
HDAC3O15379 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.04■□□□□ 0.64
HDAC3O15379 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.04■□□□□ 0.64
HDAC3O15379 KRT18P11-201ENST00000435214 1283 ntBASIC19.04■□□□□ 0.64
HDAC3O15379 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.04■□□□□ 0.64
HDAC3O15379 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HDAC3O15379 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HDAC3O15379 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.04■□□□□ 0.64
HDAC3O15379 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HDAC3O15379 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.04■□□□□ 0.64
HDAC3O15379 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.03■□□□□ 0.64
HDAC3O15379 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.03■□□□□ 0.64
HDAC3O15379 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.03■□□□□ 0.64
HDAC3O15379 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC3O15379 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC3O15379 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC3O15379 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.03■□□□□ 0.64
HDAC3O15379 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 CYP2T3P-201ENST00000601990 817 ntBASIC19.03■□□□□ 0.64
HDAC3O15379 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HDAC3O15379 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.03■□□□□ 0.64
HDAC3O15379 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.03■□□□□ 0.64
HDAC3O15379 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HDAC3O15379 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC3O15379 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC3O15379 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.03■□□□□ 0.64
HDAC3O15379 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
HDAC3O15379 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HDAC3O15379 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.02■□□□□ 0.64
HDAC3O15379 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.02■□□□□ 0.64
HDAC3O15379 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.02■□□□□ 0.64
HDAC3O15379 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HDAC3O15379 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HDAC3O15379 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.02■□□□□ 0.64
HDAC3O15379 NTF6G-201ENST00000591094 616 ntBASIC19.02■□□□□ 0.64
HDAC3O15379 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HDAC3O15379 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HDAC3O15379 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.02■□□□□ 0.63
HDAC3O15379 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HDAC3O15379 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms