Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.69■□□□□ 0.58
RTCAO00442 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.69■□□□□ 0.58
RTCAO00442 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RTCAO00442 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.69■□□□□ 0.58
RTCAO00442 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.69■□□□□ 0.58
RTCAO00442 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RTCAO00442 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 AIRN-201ENST00000601203 4374 ntBASIC18.68■□□□□ 0.58
RTCAO00442 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.68■□□□□ 0.58
RTCAO00442 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.68■□□□□ 0.58
RTCAO00442 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RTCAO00442 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RTCAO00442 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.68■□□□□ 0.58
RTCAO00442 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.68■□□□□ 0.58
RTCAO00442 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.68■□□□□ 0.58
RTCAO00442 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 AC116562.4-201ENST00000641316 2276 ntBASIC18.68■□□□□ 0.58
RTCAO00442 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RTCAO00442 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RTCAO00442 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.68■□□□□ 0.58
RTCAO00442 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTCAO00442 AC007952.6-201ENST00000573168 2673 ntBASIC18.67■□□□□ 0.58
RTCAO00442 AC003957.1-201ENST00000625108 2673 ntBASIC18.67■□□□□ 0.58
RTCAO00442 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.67■□□□□ 0.58
RTCAO00442 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RTCAO00442 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.67■□□□□ 0.58
RTCAO00442 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.67■□□□□ 0.58
RTCAO00442 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.67■□□□□ 0.58
RTCAO00442 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 AL121829.2-201ENST00000620908 328 ntBASIC18.67■□□□□ 0.58
RTCAO00442 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RTCAO00442 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.67■□□□□ 0.58
RTCAO00442 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.67■□□□□ 0.58
RTCAO00442 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTCAO00442 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.67■□□□□ 0.58
RTCAO00442 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
RTCAO00442 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RTCAO00442 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RTCAO00442 AP006587.1-201ENST00000534129 1502 ntBASIC18.66■□□□□ 0.58
RTCAO00442 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.66■□□□□ 0.58
RTCAO00442 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.66■□□□□ 0.58
RTCAO00442 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.66■□□□□ 0.58
RTCAO00442 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.66■□□□□ 0.58
RTCAO00442 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 AC069544.1-201ENST00000609399 999 ntBASIC18.66■□□□□ 0.58
RTCAO00442 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RTCAO00442 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RTCAO00442 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.66■□□□□ 0.58
RTCAO00442 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTCAO00442 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms