Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC53A6NM62 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC53A6NM62 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.11■□□□□ 0.97
LRRC53A6NM62 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LRRC53A6NM62 RAP2CP1-201ENST00000605103 478 ntBASIC21.11■□□□□ 0.97
LRRC53A6NM62 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC53A6NM62 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LRRC53A6NM62 LINC01465-201ENST00000408887 1940 ntBASIC21.11■□□□□ 0.97
LRRC53A6NM62 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC53A6NM62 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC53A6NM62 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC53A6NM62 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LRRC53A6NM62 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 TFP1-202ENST00000475455 1573 ntBASIC21.1■□□□□ 0.97
LRRC53A6NM62 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.1■□□□□ 0.97
LRRC53A6NM62 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC53A6NM62 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC53A6NM62 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.09■□□□□ 0.97
LRRC53A6NM62 CROCCP5-201ENST00000436658 830 ntBASIC21.09■□□□□ 0.97
LRRC53A6NM62 AC026185.1-201ENST00000445748 174 ntBASIC21.09■□□□□ 0.97
LRRC53A6NM62 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC53A6NM62 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC53A6NM62 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC53A6NM62 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC53A6NM62 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC53A6NM62 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC53A6NM62 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC53A6NM62 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.08■□□□□ 0.96
LRRC53A6NM62 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC53A6NM62 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC53A6NM62 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.08■□□□□ 0.96
LRRC53A6NM62 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
LRRC53A6NM62 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC53A6NM62 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC53A6NM62 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC53A6NM62 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC53A6NM62 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC53A6NM62 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms