Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 KRT18P6-201ENST00000555540 1265 ntBASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC162PA2VCL2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC162PA2VCL2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC162PA2VCL2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC162PA2VCL2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC162PA2VCL2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC162PA2VCL2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC162PA2VCL2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC162PA2VCL2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC162PA2VCL2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 POM121L13P-201ENST00000422362 380 ntBASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC162PA2VCL2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 AL121829.2-201ENST00000620908 328 ntBASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 AC093484.2-201ENST00000580996 2166 ntBASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC162PA2VCL2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC162PA2VCL2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms