Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 MYCNOS-205ENST00000641950 531 ntBASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 AC006333.2-201ENST00000607957 2099 ntBASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 TERF1P5-201ENST00000477545 1207 ntBASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 UBE2DNL-204ENST00000602536 740 ntBASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV27A0A0K0K1C4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV27A0A0K0K1C4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TRBV27A0A0K0K1C4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV27A0A0K0K1C4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.83□□□□□ -0.19
TRBV27A0A0K0K1C4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV27A0A0K0K1C4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV27A0A0K0K1C4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 AL049812.1-201ENST00000432563 2267 ntBASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 MCRIP2P1-201ENST00000394346 511 ntBASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 YBX1P1-201ENST00000445822 960 ntBASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 MFSD11-216ENST00000590393 1141 ntBASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV27A0A0K0K1C4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms