Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRBV5-5A0A0J9YX44 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-5A0A0J9YX44 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV5-5A0A0J9YX44 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 CYP2T1P-201ENST00000432607 1285 ntBASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 AL589743.5-201ENST00000616611 1050 ntBASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV5-5A0A0J9YX44 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 AC034268.1-201ENST00000441047 882 ntBASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 AC069236.1-201ENST00000604339 616 ntBASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV5-5A0A0J9YX44 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV5-5A0A0J9YX44 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms