Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 RNU6-839P-201ENST00000363347 108 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 RNA5SP433-201ENST00000364491 114 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 MIR188-201ENST00000385034 86 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AL161909.1-201ENST00000397390 712 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 SLC9B1P2-201ENST00000398120 1184 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 RPL7P44-201ENST00000424827 742 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 CYP4F32P-201ENST00000426492 504 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 RPS6P4-201ENST00000494693 758 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 SETP14-201ENST00000497538 873 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 ARL4AP1-201ENST00000503220 705 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC112225.1-201ENST00000508230 297 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 ATP1B1P1-201ENST00000509767 915 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 COX6B1P6-201ENST00000522347 255 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC002310.3-201ENST00000569728 723 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC026898.1-201ENST00000586404 571 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC004805.3-201ENST00000603178 310 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC103881.1-201ENST00000603476 538 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SPATA31C2-201ENST00000324915 3777 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 RNU6-621P-201ENST00000364752 109 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 RN7SKP296-201ENST00000411185 341 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC244452.1-201ENST00000413798 141 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC004022.2-201ENST00000413824 193 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AL389925.1-201ENST00000432257 728 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC007679.3-201ENST00000434035 414 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AL031663.1-201ENST00000437445 219 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC092809.1-201ENST00000441469 474 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AL353572.1-201ENST00000442490 417 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC104306.1-201ENST00000449702 371 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AL161747.1-201ENST00000480068 358 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC147055.4-201ENST00000504399 745 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SMARCE1P4-201ENST00000523647 241 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AP001189.2-201ENST00000527320 189 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 MIR4502-201ENST00000580432 81 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AP001981.2-201ENST00000603241 418 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 RN7SL261P-201ENST00000613441 282 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 uc_338.9-201ENST00000617424 182 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC018628.1-201ENST00000624147 3819 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 AC015726.3-201ENST00000624501 418 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms