Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL158152.1-201ENST00000602652 1435 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 GVINP1-202ENST00000531871 7271 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CX3CL1P78423 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 RLIMP2-201ENST00000427891 1563 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 AF287957.1-201ENST00000607368 1595 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CX3CL1P78423 HMGB3P7-201ENST00000400214 611 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 RNU2-18P-201ENST00000411224 162 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC138761.5-201ENST00000433967 325 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CX3CL1P78423 RPS12P17-201ENST00000438591 377 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 VN1R110P-201ENST00000438988 971 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC023141.8-201ENST00000442554 208 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 RNU1-88P-201ENST00000459274 128 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC021205.1-201ENST00000468797 348 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 PPM1AP1-201ENST00000502740 1135 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC119751.4-201ENST00000507498 357 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 GLUD1P3-202ENST00000508551 200 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC138866.2-201ENST00000508650 584 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 MTATP6P9-201ENST00000515039 680 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AL049870.4-201ENST00000555741 486 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 DHFRP1-201ENST00000579682 559 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.67□□□□□ -1.66
CX3CL1P78423 EIF1P5-201ENST00000585002 234 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 OR1AB1P-201ENST00000585564 761 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AP005229.2-201ENST00000609980 697 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC022919.1-201ENST00000624979 626 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC005618.4-201ENST00000625053 554 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 AC027088.4-201ENST00000611559 1947 ntBASIC4.67□□□□□ -1.66
CX3CL1P78423 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.67□□□□□ -1.66
CX3CL1P78423 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CX3CL1P78423 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.67□□□□□ -1.66
CX3CL1P78423 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CX3CL1P78423 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CX3CL1P78423 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CX3CL1P78423 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.66□□□□□ -1.66
CX3CL1P78423 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms