Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 SNORA70H-201ENST00000383910 135 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 SNORA70J-201ENST00000384182 135 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 RPL23AP2-201ENST00000471227 466 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 RN7SL244P-201ENST00000493405 297 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.17□□□□□ -1.9
PKHD1P08F94 AC098976.1-201ENST00000513014 541 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.17□□□□□ -1.9
PKHD1P08F94 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC3.17□□□□□ -1.9
PKHD1P08F94 ARF4P1-201ENST00000605447 541 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
PKHD1P08F94 AC018816.2-201ENST00000621460 353 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 UGT2B24P-201ENST00000514441 1597 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
PKHD1P08F94 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.16□□□□□ -1.9
PKHD1P08F94 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 AC004836.1-201ENST00000623032 634 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 AL731566.1-201ENST00000620490 1937 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 AL590240.1-201ENST00000334118 313 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 RPL21P126-201ENST00000470049 478 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 RPS27AP16-201ENST00000492222 470 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 AC073358.1-201ENST00000505671 684 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 AC027807.1-201ENST00000559921 996 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 STX3-208ENST00000641815 3236 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 FTX-215ENST00000638681 9771 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PKHD1P08F94 RPS3AP25-201ENST00000411660 793 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 AL354766.1-201ENST00000423396 542 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 RPS12P31-201ENST00000491419 398 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 AC007016.1-201ENST00000512110 244 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 IGLVIV-65-201ENST00000517313 360 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 RN7SL703P-201ENST00000578485 302 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.16□□□□□ -1.9
PKHD1P08F94 AL121932.1-201ENST00000605542 214 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 AP003400.2-201ENST00000624036 666 ntBASIC3.16□□□□□ -1.9
PKHD1P08F94 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PKHD1P08F94 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKHD1P08F94 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.15□□□□□ -1.9
PKHD1P08F94 AP005432.1-201ENST00000580891 3485 ntBASIC3.15□□□□□ -1.9
PKHD1P08F94 AC079298.1-201ENST00000625026 1619 ntBASIC3.15□□□□□ -1.9
PKHD1P08F94 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.9
PKHD1P08F94 Z95327.1-201ENST00000446082 482 ntBASIC3.15□□□□□ -1.9
PKHD1P08F94 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.15□□□□□ -1.9
PKHD1P08F94 SNORD125-201ENST00000459538 96 ntBASIC3.15□□□□□ -1.9
PKHD1P08F94 AC130364.2-201ENST00000528639 604 ntBASIC3.15□□□□□ -1.9
PKHD1P08F94 AL049536.1-201ENST00000625043 744 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms