Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
CPS1P31327 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.39□□□□□ -1.23
CPS1P31327 ZNF812P-201ENST00000457674 1694 ntBASIC7.39□□□□□ -1.23
CPS1P31327 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CPS1P31327 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CPS1P31327 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.39□□□□□ -1.23
CPS1P31327 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CPS1P31327 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 UGT2B24P-201ENST00000514441 1597 ntBASIC7.38□□□□□ -1.23
CPS1P31327 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 AC012213.2-201ENST00000562917 4597 ntBASIC7.38□□□□□ -1.23
CPS1P31327 AC100757.1-201ENST00000616872 1835 ntBASIC7.38□□□□□ -1.23
CPS1P31327 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CPS1P31327 SNORA11F-201ENST00000408237 128 ntBASIC7.38□□□□□ -1.23
CPS1P31327 AC004074.1-201ENST00000421810 1063 ntBASIC7.38□□□□□ -1.23
CPS1P31327 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.38□□□□□ -1.23
CPS1P31327 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.38□□□□□ -1.23
CPS1P31327 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.38□□□□□ -1.23
CPS1P31327 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.38□□□□□ -1.23
CPS1P31327 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.38□□□□□ -1.23
CPS1P31327 OR4A43P-201ENST00000532938 908 ntBASIC7.38□□□□□ -1.23
CPS1P31327 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.38□□□□□ -1.23
CPS1P31327 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.38□□□□□ -1.23
CPS1P31327 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
CPS1P31327 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CPS1P31327 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.38□□□□□ -1.23
CPS1P31327 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.38□□□□□ -1.23
CPS1P31327 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CPS1P31327 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 AC009951.1-201ENST00000623674 2614 ntBASIC7.37□□□□□ -1.23
CPS1P31327 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
CPS1P31327 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
CPS1P31327 AL050305.1-201ENST00000399993 1230 ntBASIC7.37□□□□□ -1.23
CPS1P31327 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.37□□□□□ -1.23
CPS1P31327 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 snoU13.22-201ENST00000459428 104 ntBASIC7.37□□□□□ -1.23
CPS1P31327 AC091912.1-201ENST00000511351 248 ntBASIC7.37□□□□□ -1.23
CPS1P31327 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.37□□□□□ -1.23
CPS1P31327 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.37□□□□□ -1.23
CPS1P31327 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
CPS1P31327 AC020915.5-201ENST00000596836 964 ntBASIC7.37□□□□□ -1.23
CPS1P31327 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.37□□□□□ -1.23
CPS1P31327 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.37□□□□□ -1.23
CPS1P31327 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.37□□□□□ -1.23
CPS1P31327 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CPS1P31327 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.37□□□□□ -1.23
CPS1P31327 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.37□□□□□ -1.23
CPS1P31327 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.37□□□□□ -1.23
CPS1P31327 PRNCR1-201ENST00000635449 12727 ntBASIC7.37□□□□□ -1.23
CPS1P31327 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.37□□□□□ -1.23
CPS1P31327 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.37□□□□□ -1.23
CPS1P31327 AL158073.1-201ENST00000426848 1104 ntBASIC7.37□□□□□ -1.23
CPS1P31327 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.37□□□□□ -1.23
CPS1P31327 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC7.37□□□□□ -1.23
CPS1P31327 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.37□□□□□ -1.23
CPS1P31327 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.37□□□□□ -1.23
CPS1P31327 GAPDHP62-201ENST00000515313 990 ntBASIC7.37□□□□□ -1.23
CPS1P31327 RNA5SP43-201ENST00000516559 110 ntBASIC7.37□□□□□ -1.23
CPS1P31327 RN7SKP92-201ENST00000517266 244 ntBASIC7.37□□□□□ -1.23
CPS1P31327 AC138701.1-201ENST00000524329 714 ntBASIC7.37□□□□□ -1.23
CPS1P31327 AC133555.2-201ENST00000550213 292 ntBASIC7.37□□□□□ -1.23
CPS1P31327 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.37□□□□□ -1.23
CPS1P31327 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.37□□□□□ -1.23
CPS1P31327 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CPS1P31327 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 AL359715.3-201ENST00000569267 2123 ntBASIC7.36□□□□□ -1.23
CPS1P31327 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CPS1P31327 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CPS1P31327 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CPS1P31327 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CPS1P31327 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CPS1P31327 AL592293.2-201ENST00000422292 996 ntBASIC7.36□□□□□ -1.23
CPS1P31327 AL451062.2-201ENST00000427515 271 ntBASIC7.36□□□□□ -1.23
CPS1P31327 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.36□□□□□ -1.23
CPS1P31327 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.36□□□□□ -1.23
CPS1P31327 RPL7P40-201ENST00000481703 745 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms