Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NANOGP9-201ENST00000439890 892 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 HMGB1P5-202ENST00000451497 985 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 NDUFA5P5-201ENST00000468361 342 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-2O95096 RN7SL284P-201ENST00000498823 275 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 IGLV3-24-201ENST00000517477 197 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-2O95096 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-2O95096 MRPS16P1-201ENST00000523462 412 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-2O95096 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC079600.1-201ENST00000550326 297 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-2O95096 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-2O95096 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC005034.4-201ENST00000603612 899 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-2O95096 BNIP3P31-201ENST00000604515 566 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 AC009120.7-201ENST00000623452 780 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 AC005618.4-201ENST00000625053 554 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-2O95096 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC087565.3-203ENST00000641018 837 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NKX2-2O95096 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NKX2-2O95096 NCOA4P2-201ENST00000340589 1813 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC025470.1-201ENST00000510053 2032 ntBASIC5.24□□□□□ -1.57
NKX2-2O95096 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.24□□□□□ -1.57
NKX2-2O95096 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.24□□□□□ -1.57
NKX2-2O95096 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-2O95096 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.24□□□□□ -1.57
NKX2-2O95096 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL161912.4-201ENST00000623889 2468 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 PWAR1-201ENST00000624188 2414 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-2O95096 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 RNA5SP394-201ENST00000364216 119 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 HMGB1P10-201ENST00000395823 563 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 HMGB1P20-201ENST00000402555 677 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 RNU4-27P-201ENST00000410889 139 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 RPS6P23-201ENST00000413224 722 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL158050.1-201ENST00000416077 457 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 MTCO2P1-201ENST00000424648 477 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-2O95096 MRPS21P3-201ENST00000436696 262 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL596266.1-201ENST00000448132 400 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL445665.1-202ENST00000452436 324 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 CLIC4P1-201ENST00000453177 535 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 PSMC1P13-201ENST00000458195 985 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 NXT1P1-201ENST00000458481 316 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 RN7SKP253-201ENST00000516424 309 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 RNU6-334P-201ENST00000517072 102 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-2O95096 SOX5P1-201ENST00000524155 1127 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 C1DP5-201ENST00000525775 383 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-2O95096 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 PMS2P3-207ENST00000529061 717 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AC006116.7-201ENST00000590141 756 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 AC018645.2-201ENST00000609151 472 ntBASIC5.23□□□□□ -1.57
NKX2-2O95096 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-2O95096 AL356274.1-201ENST00000617064 410 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms