RNA–Protein interactions for RNA: ENST00000410889.1

RNU4-27P-201, Transcript of RNA, U4 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU4-27P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-27P-201ENST00000410889 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
RNU4-27P-201ENST00000410889 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
RNU4-27P-201ENST00000410889 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
RNU4-27P-201ENST00000410889 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
RNU4-27P-201ENST00000410889 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
RNU4-27P-201ENST00000410889 FOXD1Q16676 465 aa18.18■□□□□ 0.5
RNU4-27P-201ENST00000410889 ADRA2BP18089 450 aa17.79■□□□□ 0.44
RNU4-27P-201ENST00000410889 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
RNU4-27P-201ENST00000410889 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
RNU4-27P-201ENST00000410889 KCNA4P22459 653 aa16.72■□□□□ 0.27
RNU4-27P-201ENST00000410889 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
RNU4-27P-201ENST00000410889 MSH5O43196 834 aa16.7■□□□□ 0.26
RNU4-27P-201ENST00000410889 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
RNU4-27P-201ENST00000410889 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
RNU4-27P-201ENST00000410889 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
RNU4-27P-201ENST00000410889 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
RNU4-27P-201ENST00000410889 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
RNU4-27P-201ENST00000410889 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
RNU4-27P-201ENST00000410889 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
RNU4-27P-201ENST00000410889 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
RNU4-27P-201ENST00000410889 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
RNU4-27P-201ENST00000410889 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
RNU4-27P-201ENST00000410889 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
RNU4-27P-201ENST00000410889 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
RNU4-27P-201ENST00000410889 ZBTB22O15209 634 aa15.33■□□□□ 0.04
RNU4-27P-201ENST00000410889 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
RNU4-27P-201ENST00000410889 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
RNU4-27P-201ENST00000410889 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
RNU4-27P-201ENST00000410889 MYCNP04198 464 aaPredicted RBP14.95□□□□□ -0.02
RNU4-27P-201ENST00000410889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
RNU4-27P-201ENST00000410889 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
RNU4-27P-201ENST00000410889 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
RNU4-27P-201ENST00000410889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
RNU4-27P-201ENST00000410889 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
RNU4-27P-201ENST00000410889 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
RNU4-27P-201ENST00000410889 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
RNU4-27P-201ENST00000410889 APLP2Q06481 763 aa14.48□□□□□ -0.09
RNU4-27P-201ENST00000410889 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
RNU4-27P-201ENST00000410889 RNF39Q9H2S5 420 aa14.28□□□□□ -0.12
RNU4-27P-201ENST00000410889 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
RNU4-27P-201ENST00000410889 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
RNU4-27P-201ENST00000410889 FKBP8Q14318 412 aa14.14□□□□□ -0.15
RNU4-27P-201ENST00000410889 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
RNU4-27P-201ENST00000410889 CAPN15O75808 1086 aa14.12□□□□□ -0.15
RNU4-27P-201ENST00000410889 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
RNU4-27P-201ENST00000410889 POLA2Q14181 598 aa13.96□□□□□ -0.17
RNU4-27P-201ENST00000410889 FBLN2P98095 1184 aa13.93□□□□□ -0.18
RNU4-27P-201ENST00000410889 ABCB7O75027 752 aa13.85□□□□□ -0.19
RNU4-27P-201ENST00000410889 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
RNU4-27P-201ENST00000410889 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
RNU4-27P-201ENST00000410889 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
RNU4-27P-201ENST00000410889 DSG3P32926 999 aa13.72□□□□□ -0.21
RNU4-27P-201ENST00000410889 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
RNU4-27P-201ENST00000410889 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
RNU4-27P-201ENST00000410889 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
RNU4-27P-201ENST00000410889 PROM2Q8N271 834 aa13.51□□□□□ -0.25
RNU4-27P-201ENST00000410889 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
RNU4-27P-201ENST00000410889 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
RNU4-27P-201ENST00000410889 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
RNU4-27P-201ENST00000410889 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
RNU4-27P-201ENST00000410889 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
RNU4-27P-201ENST00000410889 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
RNU4-27P-201ENST00000410889 VASPP50552 380 aaPredicted RBP13.33□□□□□ -0.28
RNU4-27P-201ENST00000410889 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
RNU4-27P-201ENST00000410889 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
RNU4-27P-201ENST00000410889 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
RNU4-27P-201ENST00000410889 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
RNU4-27P-201ENST00000410889 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
RNU4-27P-201ENST00000410889 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
RNU4-27P-201ENST00000410889 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
RNU4-27P-201ENST00000410889 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
RNU4-27P-201ENST00000410889 MIER1Q8N108 512 aa13.04□□□□□ -0.32
RNU4-27P-201ENST00000410889 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
RNU4-27P-201ENST00000410889 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
RNU4-27P-201ENST00000410889 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
RNU4-27P-201ENST00000410889 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
RNU4-27P-201ENST00000410889 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
RNU4-27P-201ENST00000410889 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
RNU4-27P-201ENST00000410889 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
RNU4-27P-201ENST00000410889 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
RNU4-27P-201ENST00000410889 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
RNU4-27P-201ENST00000410889 PKD2Q13563 968 aa12.83□□□□□ -0.36
RNU4-27P-201ENST00000410889 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
RNU4-27P-201ENST00000410889 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
RNU4-27P-201ENST00000410889 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
RNU4-27P-201ENST00000410889 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
RNU4-27P-201ENST00000410889 GSE1Q14687 1217 aa12.65□□□□□ -0.38
RNU4-27P-201ENST00000410889 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
RNU4-27P-201ENST00000410889 NUBP1P53384 320 aa12.6□□□□□ -0.39
RNU4-27P-201ENST00000410889 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNU4-27P-201ENST00000410889 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
RNU4-27P-201ENST00000410889 FAM212AQ96EL1 285 aa12.59□□□□□ -0.39
RNU4-27P-201ENST00000410889 RGL2O15211 777 aa12.57□□□□□ -0.4
RNU4-27P-201ENST00000410889 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
RNU4-27P-201ENST00000410889 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
RNU4-27P-201ENST00000410889 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
RNU4-27P-201ENST00000410889 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
RNU4-27P-201ENST00000410889 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
RNU4-27P-201ENST00000410889 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
RNU4-27P-201ENST00000410889 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms