Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.3□□□□□ -1.24
HPS1Q92902 LCOR-201ENST00000286067 4542 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 RNU6-223P-201ENST00000362830 107 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 RNA5SP483-201ENST00000363431 118 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC092642.1-201ENST00000392417 425 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 MIR1296-201ENST00000408136 92 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 MIR1269A-201ENST00000408636 105 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 RPL21P107-201ENST00000411449 460 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 MTATP6P18-201ENST00000417994 673 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC116050.1-206ENST00000423774 213 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 DPY19L1P2-201ENST00000426647 915 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 RPS27AP6-201ENST00000427962 448 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC239367.1-201ENST00000439389 936 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AL035417.1-201ENST00000442754 214 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 H2AFZP6-201ENST00000444403 394 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 PRELID1P3-201ENST00000450055 643 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC073522.1-201ENST00000483312 377 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC104564.1-201ENST00000493028 407 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC122714.1-201ENST00000502510 459 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 NMNAT1P4-201ENST00000505598 840 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC093303.1-201ENST00000514549 295 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 TPM3P3-201ENST00000521343 354 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC068587.4-201ENST00000533893 186 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.29□□□□□ -1.24
HPS1Q92902 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.29□□□□□ -1.24
HPS1Q92902 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 MIR3187-201ENST00000583431 70 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 CKS1BP3-201ENST00000600888 237 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC087763.1-201ENST00000603391 286 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AL161734.1-201ENST00000609720 557 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AL732618.1-201ENST00000623251 301 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 AC244517.12-201ENST00000623581 663 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 SEM1-224ENST00000623693 729 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 AC231657.1-201ENST00000624313 397 ntBASIC7.29□□□□□ -1.24
HPS1Q92902 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.29□□□□□ -1.24
HPS1Q92902 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
HPS1Q92902 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
HPS1Q92902 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.29□□□□□ -1.24
HPS1Q92902 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.28□□□□□ -1.24
HPS1Q92902 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
HPS1Q92902 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.28□□□□□ -1.24
HPS1Q92902 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HPS1Q92902 AC010533.1-201ENST00000624875 2105 ntBASIC7.28□□□□□ -1.24
HPS1Q92902 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HPS1Q92902 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HPS1Q92902 AC110716.2-201ENST00000563865 3945 ntBASIC7.28□□□□□ -1.24
HPS1Q92902 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
HPS1Q92902 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.28□□□□□ -1.24
HPS1Q92902 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
HPS1Q92902 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HPS1Q92902 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.28□□□□□ -1.24
HPS1Q92902 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
HPS1Q92902 AC010132.2-201ENST00000295493 1043 ntBASIC7.28□□□□□ -1.24
HPS1Q92902 FO393411.1-201ENST00000325612 420 ntBASIC7.28□□□□□ -1.24
HPS1Q92902 Y_RNA.148-201ENST00000363557 117 ntBASIC7.28□□□□□ -1.24
HPS1Q92902 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
HPS1Q92902 Y_RNA.556-201ENST00000384677 113 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms