Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 RNA5SP477-201ENST00000362639 119 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AL390879.2-203ENST00000426943 1121 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 BX323845.3-201ENST00000428215 527 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 SDR42E1P3-201ENST00000438345 502 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 LSM3P4-201ENST00000502948 309 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 NENFP3-201ENST00000503735 313 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 IMPA1P1-201ENST00000510718 842 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 Y_RNA.667-201ENST00000516212 107 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 CDC42P3-201ENST00000518493 633 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC027369.5-201ENST00000533838 755 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 LINC00556-201ENST00000569603 412 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC007342.5-201ENST00000571340 2142 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC084036.1-201ENST00000609190 508 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC119674.1-220ENST00000641502 1048 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 AC011755.1-201ENST00000623763 2049 ntBASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SLC44A1Q8WWI5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 OR1L6-202ENST00000373684 1044 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 RNA5SP122-201ENST00000384457 108 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 EI24P3-201ENST00000399046 1062 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 MIR1203-201ENST00000408812 85 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 EEF1B2P8-201ENST00000414101 671 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC066692.1-201ENST00000421721 457 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 RPL19P16-201ENST00000433839 588 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 MTND6P5-201ENST00000448266 512 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC090568.1-201ENST00000509499 856 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC006499.4-201ENST00000510947 694 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 TRIM77BP-201ENST00000524985 1119 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC005000.1-201ENST00000536192 288 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC040958.1-201ENST00000561102 201 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms