Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
SCUBE3Q8IX30 AC005383.1-201ENST00000622689 534 ntBASIC8□□□□□ -1.13
SCUBE3Q8IX30 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8□□□□□ -1.13
SCUBE3Q8IX30 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8□□□□□ -1.13
SCUBE3Q8IX30 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8□□□□□ -1.13
SCUBE3Q8IX30 AC020978.8-201ENST00000571975 3022 ntBASIC8□□□□□ -1.13
SCUBE3Q8IX30 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8□□□□□ -1.13
SCUBE3Q8IX30 AL157831.2-201ENST00000564681 3095 ntBASIC8□□□□□ -1.13
SCUBE3Q8IX30 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8□□□□□ -1.13
SCUBE3Q8IX30 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8□□□□□ -1.13
SCUBE3Q8IX30 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCUBE3Q8IX30 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 OR4A15-201ENST00000314706 1035 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RNA5SP448-201ENST00000363151 111 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RNA5SP79-201ENST00000365193 109 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RNU6-510P-201ENST00000391239 108 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RPL23AP47-201ENST00000408017 460 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RNU2-47P-201ENST00000410649 186 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RNU4-61P-201ENST00000411243 107 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 FTH1P5-201ENST00000425761 545 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 DYNLL1P7-201ENST00000429273 258 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 GAPDHP19-201ENST00000431768 1005 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 BMS1P19-201ENST00000433925 393 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AL954705.1-201ENST00000435277 559 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 NDUFA5P7-201ENST00000452914 242 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC022730.2-201ENST00000465359 452 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC112206.1-201ENST00000468416 477 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC233724.10-201ENST00000510454 409 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 MTND5P4-201ENST00000514978 288 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AP003467.2-201ENST00000520175 319 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 BMS1P15-201ENST00000554269 1141 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 UBE2CP1-201ENST00000557130 554 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC055876.1-202ENST00000567053 138 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 ZNF322P1-201ENST00000568013 1209 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 MIR4685-201ENST00000578185 69 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC007136.1-201ENST00000589141 199 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC005518.2-201ENST00000603254 282 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC011816.2-201ENST00000607089 556 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC009268.2-201ENST00000621925 457 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC129908.1-201ENST00000624553 648 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC138649.5-201ENST00000637456 137 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC024560.2-201ENST00000507981 1497 ntBASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCUBE3Q8IX30 AC097634.1-201ENST00000604491 2467 ntBASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
SCUBE3Q8IX30 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms