Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL359091.1-201ENST00000449048 1734 ntBASIC5.82□□□□□ -1.48
PACSIN3Q9UKS6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PACSIN3Q9UKS6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PACSIN3Q9UKS6 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 SAMMSON-210ENST00000641260 1308 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 MIR16-2-201ENST00000362117 81 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 RNU1-65P-201ENST00000363919 148 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ARMC4P1-201ENST00000438905 707 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC093166.3-201ENST00000448785 303 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 H3F3AP5-201ENST00000475267 429 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PPP1R11P1-201ENST00000486095 376 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC090543.1-201ENST00000492168 485 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC018645.1-201ENST00000505003 109 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC108157.1-201ENST00000510511 539 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 MTCYBP37-201ENST00000510642 1133 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 RNU6-889P-201ENST00000517189 103 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 CYCSP25-201ENST00000525280 316 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC004775.1-201ENST00000607389 753 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 uc_338.26-201ENST00000612659 160 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 RN7SL261P-201ENST00000613441 282 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC025016.1-201ENST00000616746 682 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AL122023.1-201ENST00000622847 530 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AP000676.3-201ENST00000623299 569 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AL683826.1-201ENST00000624104 627 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 AL592429.1-201ENST00000403909 1473 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 CR382285.2-201ENST00000624662 1495 ntBASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.81□□□□□ -1.48
PACSIN3Q9UKS6 SAMM50P1-201ENST00000455403 1399 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 CASC19-238ENST00000641523 1558 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 RNU4-24P-201ENST00000364565 139 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 RN7SKP28-201ENST00000364770 305 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 SNORD116-9-201ENST00000384000 95 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 SNORD116-3-201ENST00000384287 95 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 SNORD116-7-201ENST00000384404 95 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 SNORD116-5-201ENST00000384462 95 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 RNU6-192P-201ENST00000391253 100 ntBASIC5.8□□□□□ -1.48
PACSIN3Q9UKS6 AL121978.1-201ENST00000402778 359 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms