Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 DIAPH3-203ENST00000400319 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL25A1Q9BXS0 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL356361.1-201ENST00000400943 1459 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 RNU6-474P-201ENST00000384243 107 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 RNU6-505P-201ENST00000384427 107 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 CYCSP45-201ENST00000402289 315 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL391361.1-201ENST00000405580 489 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 RNU4-55P-201ENST00000410731 137 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC236972.2-201ENST00000434979 310 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC073072.2-201ENST00000447425 348 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL033528.1-201ENST00000453780 140 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 HLA-DPA3-207ENST00000454398 229 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 MTCO2P29-201ENST00000465212 189 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC091153.1-201ENST00000466297 402 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 MTND6P2-201ENST00000512226 524 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AF131216.2-201ENST00000512316 564 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 IGLVIV-59-201ENST00000520218 250 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC113139.1-201ENST00000605049 239 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC012603.1-201ENST00000606424 528 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC087588.2-201ENST00000617667 426 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL731566.2-201ENST00000618971 317 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC018445.2-201ENST00000622987 260 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 SNX18P10-201ENST00000625014 519 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL25A1Q9BXS0 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 XRCC6P4-201ENST00000518193 2067 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 AC131392.2-201ENST00000505635 4332 ntBASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL25A1Q9BXS0 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms