Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC139426.3-201ENST00000605648 2059 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 OR5E1P-201ENST00000305754 927 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RNU6-1097P-201ENST00000363586 107 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RNU4-7P-201ENST00000364758 141 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RNU1-8P-201ENST00000384328 165 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RNU1-149P-201ENST00000390870 161 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 CNN2P7-201ENST00000400583 932 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RFKP1-201ENST00000400940 428 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RNU2-28P-201ENST00000410457 189 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RNU4-14P-201ENST00000410858 122 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 GPR143P-201ENST00000434155 205 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 ACTBP12-201ENST00000435871 418 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 CICP10-201ENST00000439497 198 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 RNU7-136P-201ENST00000458819 69 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RPL34P34-201ENST00000465389 354 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 MTATP8P1-201ENST00000467115 207 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 RN7SL223P-201ENST00000470401 294 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC010655.3-201ENST00000478818 450 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 ENPP7P10-201ENST00000504828 933 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC010587.1-201ENST00000505809 469 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC025674.1-201ENST00000507074 324 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC090502.2-201ENST00000549267 280 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AL109628.2-201ENST00000554037 201 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AC011444.4-201ENST00000586415 418 ntBASIC7.41□□□□□ -1.22
USB1Q9BQ65 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
USB1Q9BQ65 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
USB1Q9BQ65 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AL136981.1-203ENST00000451452 3844 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC110716.2-201ENST00000563865 3945 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC006213.6-201ENST00000623722 4179 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 OR1S2-201ENST00000302592 978 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 RN7SKP25-201ENST00000362449 308 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 Y_RNA.47-201ENST00000362697 108 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 Y_RNA.100-201ENST00000363141 102 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 RNU12-2P-201ENST00000364789 156 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 RNU6-730P-201ENST00000383954 104 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 RNU2-3P-201ENST00000410144 191 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 RNU6-985P-201ENST00000410182 104 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 RNU6-1304P-201ENST00000411374 106 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC009302.1-201ENST00000417147 390 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AL031733.1-201ENST00000422817 455 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms