RNA–Protein interactions for RNA: ENST00000504642.1

TNFAIP8-205, Transcript of TNF alpha induced protein 8, humanhuman

TSL 3 BASIC

Gene TNFAIP8, Length 711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-205ENST00000504642 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
TNFAIP8-205ENST00000504642 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
TNFAIP8-205ENST00000504642 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
TNFAIP8-205ENST00000504642 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
TNFAIP8-205ENST00000504642 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
TNFAIP8-205ENST00000504642 FOXD1Q16676 465 aa14.23□□□□□ -0.13
TNFAIP8-205ENST00000504642 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
TNFAIP8-205ENST00000504642 ADRA2BP18089 450 aa13.74□□□□□ -0.21
TNFAIP8-205ENST00000504642 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
TNFAIP8-205ENST00000504642 MSH5O43196 834 aa13.11□□□□□ -0.31
TNFAIP8-205ENST00000504642 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
TNFAIP8-205ENST00000504642 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
TNFAIP8-205ENST00000504642 KCNA4P22459 653 aa12.58□□□□□ -0.4
TNFAIP8-205ENST00000504642 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
TNFAIP8-205ENST00000504642 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP8-205ENST00000504642 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
TNFAIP8-205ENST00000504642 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
TNFAIP8-205ENST00000504642 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
TNFAIP8-205ENST00000504642 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
TNFAIP8-205ENST00000504642 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP8-205ENST00000504642 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
TNFAIP8-205ENST00000504642 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
TNFAIP8-205ENST00000504642 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
TNFAIP8-205ENST00000504642 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
TNFAIP8-205ENST00000504642 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
TNFAIP8-205ENST00000504642 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
TNFAIP8-205ENST00000504642 ZBTB22O15209 634 aa11.59□□□□□ -0.55
TNFAIP8-205ENST00000504642 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
TNFAIP8-205ENST00000504642 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
TNFAIP8-205ENST00000504642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNFAIP8-205ENST00000504642 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP8-205ENST00000504642 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP8-205ENST00000504642 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
TNFAIP8-205ENST00000504642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP8-205ENST00000504642 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
TNFAIP8-205ENST00000504642 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
TNFAIP8-205ENST00000504642 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP8-205ENST00000504642 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
TNFAIP8-205ENST00000504642 APLP2Q06481 763 aa11.1□□□□□ -0.63
TNFAIP8-205ENST00000504642 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
TNFAIP8-205ENST00000504642 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
TNFAIP8-205ENST00000504642 ZNF219Q9P2Y4 722 aaPredicted RBP10.91□□□□□ -0.66
TNFAIP8-205ENST00000504642 CAPN15O75808 1086 aa10.89□□□□□ -0.67
TNFAIP8-205ENST00000504642 TRHP20396 242 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP8-205ENST00000504642 CACNB1Q02641 598 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP8-205ENST00000504642 POLA2Q14181 598 aa10.73□□□□□ -0.69
TNFAIP8-205ENST00000504642 DSG3P32926 999 aa10.72□□□□□ -0.69
TNFAIP8-205ENST00000504642 ABCB7O75027 752 aa10.68□□□□□ -0.7
TNFAIP8-205ENST00000504642 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP8-205ENST00000504642 FBLN2P98095 1184 aa10.57□□□□□ -0.72
TNFAIP8-205ENST00000504642 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP8-205ENST00000504642 FKBP8Q14318 412 aa10.46□□□□□ -0.73
TNFAIP8-205ENST00000504642 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
TNFAIP8-205ENST00000504642 OSCARQ8IYS5 282 aa10.34□□□□□ -0.75
TNFAIP8-205ENST00000504642 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
TNFAIP8-205ENST00000504642 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
TNFAIP8-205ENST00000504642 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
TNFAIP8-205ENST00000504642 PROM2Q8N271 834 aa10.28□□□□□ -0.76
TNFAIP8-205ENST00000504642 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
TNFAIP8-205ENST00000504642 SSUH2Q9Y2M2 353 aa10.26□□□□□ -0.77
TNFAIP8-205ENST00000504642 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
TNFAIP8-205ENST00000504642 AKT1S1Q96B36 256 aa10.13□□□□□ -0.79
TNFAIP8-205ENST00000504642 PABPN1Q86U42 306 aaKnown RBP eCLIP10.12□□□□□ -0.79
TNFAIP8-205ENST00000504642 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
TNFAIP8-205ENST00000504642 STAG3Q9UJ98 1225 aa10.02□□□□□ -0.81
TNFAIP8-205ENST00000504642 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
TNFAIP8-205ENST00000504642 SPDYE1Q8NFV5 336 aaPredicted RBP9.97□□□□□ -0.81
TNFAIP8-205ENST00000504642 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP8-205ENST00000504642 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
TNFAIP8-205ENST00000504642 CLEC11AQ9Y240 323 aa9.87□□□□□ -0.83
TNFAIP8-205ENST00000504642 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
TNFAIP8-205ENST00000504642 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
TNFAIP8-205ENST00000504642 MIER1Q8N108 512 aa9.81□□□□□ -0.84
TNFAIP8-205ENST00000504642 PLCD3Q8N3E9 789 aa9.81□□□□□ -0.84
TNFAIP8-205ENST00000504642 PLEKHG5O94827 1062 aa9.76□□□□□ -0.85
TNFAIP8-205ENST00000504642 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP8-205ENST00000504642 CREBZFQ9NS37 354 aa9.75□□□□□ -0.85
TNFAIP8-205ENST00000504642 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
TNFAIP8-205ENST00000504642 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
TNFAIP8-205ENST00000504642 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
TNFAIP8-205ENST00000504642 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
TNFAIP8-205ENST00000504642 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
TNFAIP8-205ENST00000504642 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP8-205ENST00000504642 RTN4Q9NQC3 1192 aaKnown RBP9.68□□□□□ -0.86
TNFAIP8-205ENST00000504642 PIP4P2Q8N4L2 257 aa9.64□□□□□ -0.87
TNFAIP8-205ENST00000504642 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
TNFAIP8-205ENST00000504642 CHADLQ6NUI6 762 aa9.63□□□□□ -0.87
TNFAIP8-205ENST00000504642 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
TNFAIP8-205ENST00000504642 NUBP1P53384 320 aa9.59□□□□□ -0.87
TNFAIP8-205ENST00000504642 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP8-205ENST00000504642 PKD2Q13563 968 aa9.54□□□□□ -0.88
TNFAIP8-205ENST00000504642 GSE1Q14687 1217 aa9.51□□□□□ -0.89
TNFAIP8-205ENST00000504642 RASEFQ8IZ41 740 aa9.5□□□□□ -0.89
TNFAIP8-205ENST00000504642 FAM212AQ96EL1 285 aa9.48□□□□□ -0.89
TNFAIP8-205ENST00000504642 CIZ1Q9ULV3 898 aaPredicted RBP9.48□□□□□ -0.89
TNFAIP8-205ENST00000504642 TRIM41Q8WV44 630 aa9.47□□□□□ -0.89
TNFAIP8-205ENST00000504642 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
TNFAIP8-205ENST00000504642 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP8-205ENST00000504642 CHRM1P11229 460 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP8-205ENST00000504642 PAK3O75914 559 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms