Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC016582.1-202ENST00000636341 2982 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 SMG1P5-202ENST00000529428 4219 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 SMG1P2-201ENST00000566127 4221 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC110998.1-201ENST00000519029 2053 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 OR10J6P-201ENST00000289731 930 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 IL6STP1-201ENST00000346911 1020 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 GCNT1P4-201ENST00000404096 329 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 SNORA77.2-201ENST00000408571 112 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AL139421.1-201ENST00000423010 169 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC005534.2-201ENST00000431047 433 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 DPPA3P1-201ENST00000448050 469 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC135721.2-201ENST00000464237 300 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 RPS3AP17-201ENST00000472594 777 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC097173.1-201ENST00000505862 819 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 IMPA1P1-201ENST00000510718 842 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 IGKV3D-34-201ENST00000522638 302 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 OR5AK1P-201ENST00000524837 922 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 FAM92A1P1-201ENST00000528023 890 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC023968.1-201ENST00000560719 475 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 RN7SL366P-201ENST00000577957 292 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC009033.1-201ENST00000624279 431 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 FAM157B-203ENST00000639350 358 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AL596275.2-203ENST00000641951 371 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC087501.5-201ENST00000607496 2374 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 AC089998.1-201ENST00000548575 3141 ntBASIC8.54□□□□□ -1.04
RC3H1Q5TC82 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 SNORA38B-201ENST00000363524 131 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RNU6-931P-201ENST00000363850 107 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 Y_RNA.548-201ENST00000384656 105 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RPL31P1-201ENST00000398116 372 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 SNORA11B-201ENST00000408175 129 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC017035.1-201ENST00000411999 1115 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 RPS7P12-201ENST00000422385 582 ntBASIC8.53□□□□□ -1.04
RC3H1Q5TC82 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.53□□□□□ -1.04
RC3H1Q5TC82 COX4I1P2-201ENST00000447446 547 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms