Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC1A1P43005 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC1A1P43005 MIR1273E-201ENST00000581165 102 ntBASIC5.57□□□□□ -1.52
SLC1A1P43005 AC005726.4-201ENST00000582858 458 ntBASIC5.57□□□□□ -1.52
SLC1A1P43005 AC011626.1-201ENST00000604710 562 ntBASIC5.57□□□□□ -1.52
SLC1A1P43005 AL139041.1-201ENST00000605480 610 ntBASIC5.57□□□□□ -1.52
SLC1A1P43005 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC1A1P43005 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SLC1A1P43005 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.57□□□□□ -1.52
SLC1A1P43005 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC1A1P43005 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.57□□□□□ -1.52
SLC1A1P43005 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC1A1P43005 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC1A1P43005 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC1A1P43005 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SLC1A1P43005 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SLC1A1P43005 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC1A1P43005 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC1A1P43005 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AC064862.4-201ENST00000442180 334 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 TCEA1P3-201ENST00000443005 880 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC1A1P43005 BX842559.2-201ENST00000451418 605 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 RN7SL51P-201ENST00000468230 285 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 RPL7P40-201ENST00000481703 745 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 AC090638.1-201ENST00000498296 909 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC1A1P43005 BLZF2P-201ENST00000553776 1130 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC1A1P43005 FAM72A-208ENST00000607379 1139 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 AC000068.2-201ENST00000608816 460 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 ADAM5-202ENST00000399789 1942 ntBASIC5.56□□□□□ -1.52
SLC1A1P43005 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC1A1P43005 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC1A1P43005 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC1A1P43005 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SLC1A1P43005 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC1A1P43005 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 AC107977.1-201ENST00000355745 939 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 RNA5SP319-201ENST00000362768 119 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC1A1P43005 AL133388.1-201ENST00000404509 287 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 RPL24P2-201ENST00000421023 475 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 AL161722.2-201ENST00000434731 981 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 RPL23AP19-201ENST00000436229 369 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 RPS11P7-201ENST00000442125 465 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC1A1P43005 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC1A1P43005 AC006427.1-201ENST00000514359 712 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 AC022826.1-201ENST00000519383 805 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.55□□□□□ -1.52
SLC1A1P43005 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 AC068993.1-201ENST00000546724 589 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC1A1P43005 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC1A1P43005 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC1A1P43005 RN7SL708P-201ENST00000580952 299 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC1A1P43005 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 MTCO1P1-201ENST00000624263 1081 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC1A1P43005 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SLC1A1P43005 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC1A1P43005 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC1A1P43005 AL034549.2-201ENST00000618285 3373 ntBASIC5.55□□□□□ -1.52
SLC1A1P43005 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC1A1P43005 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms