Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNGA1P29973 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.91□□□□□ -1.3
CNGA1P29973 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CNGA1P29973 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC027088.4-201ENST00000611559 1947 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CNGA1P29973 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.9□□□□□ -1.3
CNGA1P29973 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 MIR375-201ENST00000362103 64 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AP002784.2-201ENST00000397300 549 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AL445238.1-204ENST00000400311 463 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AL096829.1-201ENST00000413677 457 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC234781.4-201ENST00000419384 244 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.9□□□□□ -1.3
CNGA1P29973 AL355433.1-201ENST00000422804 300 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AC115285.1-201ENST00000424879 736 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 RN7SL515P-201ENST00000463999 297 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AC008427.1-201ENST00000503102 655 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.9□□□□□ -1.3
CNGA1P29973 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.9□□□□□ -1.3
CNGA1P29973 RN7SKP141-201ENST00000516167 338 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 RNU6-1308P-201ENST00000516817 103 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 SNORA70.20-201ENST00000516848 126 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 MTND2P32-201ENST00000521584 1038 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AC013701.1-201ENST00000522657 465 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC109635.6-201ENST00000525487 1113 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC118942.1-201ENST00000529674 1035 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC090651.1-201ENST00000567865 634 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.9□□□□□ -1.3
CNGA1P29973 AC012557.1-201ENST00000607115 611 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 AC063944.3-201ENST00000609969 533 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 RMST_10.1-201ENST00000616309 154 ntBASIC6.9□□□□□ -1.3
CNGA1P29973 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.9□□□□□ -1.3
CNGA1P29973 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNGA1P29973 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNGA1P29973 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CNGA1P29973 AC053481.2-202ENST00000582394 1500 ntBASIC6.9□□□□□ -1.31
CNGA1P29973 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNGA1P29973 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.9□□□□□ -1.31
CNGA1P29973 HSPD1P11-201ENST00000508643 1702 ntBASIC6.9□□□□□ -1.31
CNGA1P29973 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CNGA1P29973 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNGA1P29973 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNGA1P29973 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.89□□□□□ -1.31
CNGA1P29973 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNGA1P29973 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CNGA1P29973 OR9K1P-201ENST00000326513 941 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNGA1P29973 RNU5E-10P-201ENST00000363506 118 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 RN7SKP160-201ENST00000363804 340 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.89□□□□□ -1.31
CNGA1P29973 SNRPEP6-201ENST00000407465 277 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 SNORA79B-201ENST00000410557 148 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 RPL34P3-201ENST00000421454 338 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.89□□□□□ -1.31
CNGA1P29973 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.89□□□□□ -1.31
CNGA1P29973 CDH12P2-201ENST00000504393 298 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 ASNSP4-201ENST00000511103 447 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 SNORA31.13-201ENST00000516624 135 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.89□□□□□ -1.31
CNGA1P29973 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.89□□□□□ -1.31
CNGA1P29973 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNGA1P29973 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.89□□□□□ -1.31
CNGA1P29973 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.89□□□□□ -1.31
CNGA1P29973 OR4A6P-201ENST00000534364 970 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.89□□□□□ -1.31
CNGA1P29973 AL049870.4-201ENST00000555741 486 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CNGA1P29973 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.89□□□□□ -1.31
CNGA1P29973 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.89□□□□□ -1.31
CNGA1P29973 AC010547.6-201ENST00000571789 193 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.89□□□□□ -1.31
CNGA1P29973 MIR4420-201ENST00000583944 77 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 AC006116.5-201ENST00000591936 559 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 OR7A19P-201ENST00000608051 733 ntBASIC6.89□□□□□ -1.31
CNGA1P29973 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms